Difference between revisions of "TSS:Hg 102000.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=1179 |entrez_id=23392 |gc_percent=0.78607 |gene_alias=ECM29 |gene_description=KIAA0368 |gene_name=KIAA0368 |gene_type=protein-c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK308313:0 ENST00000602447.5:-100 uc064vax.1:-100 AK122712:-448 ENST00000602978.1:-478 uc064vay.1:-478 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=1179 | |distance_to_tss=1179 | ||
| + | |end=111483579 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=ECM29 | |gene_alias=ECM29 | ||
|gene_description=KIAA0368 | |gene_description=KIAA0368 | ||
| + | |gene_id=23392 | ||
|gene_name=KIAA0368 | |gene_name=KIAA0368 | ||
| + | |gene_source=HGNC:29020 | ||
| + | |gene_symbol=KIAA0368 | ||
| + | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
|nearest_promoter_id=NM_001080398 | |nearest_promoter_id=NM_001080398 | ||
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=111483552 | ||
| + | |strand=- | ||
| + | |transcript_name=AK308313 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102000.1 | |tss_id=hg_102000.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK308313 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK308313:0 ENST00000602447.5:-100 uc064vax.1:-100 AK122712:-448 ENST00000602978.1:-478 uc064vay.1:-478 |
TATA-Box annotation
| Distance to TSS: | 1179 |
|---|---|
| Nearest PromoterID: | NM_001080398 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | KIAA0368 |
| Gene Alias: | ECM29 |
| Gene Description: | KIAA0368 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
