Difference between revisions of "TSS:Hg 102009.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=852 |entrez_id=23392 |gc_percent=0.761194 |gene_alias=ECM29 |gene_description=KIAA0368 |gene_name=KIAA0368 |gene_type=protein-c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK122712:-129 ENST00000602978.1:-159 uc064vay.1:-159 ENST00000602447.5:209 uc064vax.1:209 AK308313:326 ENST00000338205.9:-459 uc064vau.1:-459 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=-129 | ||
|distance_to_tss=852 | |distance_to_tss=852 | ||
| + | |end=111483898 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=ECM29 | |gene_alias=ECM29 | ||
|gene_description=KIAA0368 | |gene_description=KIAA0368 | ||
| + | |gene_id=23392 | ||
|gene_name=KIAA0368 | |gene_name=KIAA0368 | ||
| + | |gene_source=HGNC:29020 | ||
| + | |gene_symbol=KIAA0368 | ||
| + | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
|nearest_promoter_id=NM_001080398 | |nearest_promoter_id=NM_001080398 | ||
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=111483887 | ||
| + | |strand=- | ||
| + | |transcript_name=AK122712 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102009.1 | |tss_id=hg_102009.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KV72 | ||
}} | }} | ||
Revision as of 19:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK122712 |
|---|---|
| Distance: | -129 |
| Num_trans: | 8 |
| All_trans: | AK122712:-129 ENST00000602978.1:-159 uc064vay.1:-159 ENST00000602447.5:209 uc064vax.1:209 AK308313:326 ENST00000338205.9:-459 uc064vau.1:-459 |
TATA-Box annotation
| Distance to TSS: | 852 |
|---|---|
| Nearest PromoterID: | NM_001080398 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | KIAA0368 |
| Gene Alias: | ECM29 |
| Gene Description: | KIAA0368 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
