Difference between revisions of "TSS:Mm 100057.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK220084:304 AK210179:-308 AK193026:-312 AK189671:-326 AK202144:-326 AK207970:-326 AK211812:-326 AK214472:-326 AB349270:-360 AK196097:-412 AK203762:-436...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NMDAR2C= | ||
| + | |NR2C= | ||
|all_trans=AK220084:304 AK210179:-308 AK193026:-312 AK189671:-326 AK202144:-326 AK207970:-326 AK211812:-326 AK214472:-326 AB349270:-360 AK196097:-412 AK203762:-436 AK191682:-449 AK219230:-468 AK207693:-470 AK209579:-470 AK205447:-470 AK190182:-470 AK219640:-470 AK211402:-470 AK211472:-470 AK202321:-470 | |all_trans=AK220084:304 AK210179:-308 AK193026:-312 AK189671:-326 AK202144:-326 AK207970:-326 AK211812:-326 AK214472:-326 AB349270:-360 AK196097:-412 AK203762:-436 AK191682:-449 AK219230:-468 AK207693:-470 AK209579:-470 AK205447:-470 AK190182:-470 AK219640:-470 AK211402:-470 AK211472:-470 AK202321:-470 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=21972 | |distance_to_tss=21972 | ||
|end=115245280 | |end=115245280 | ||
| + | |end_of_center_position=115245272 | ||
|entrez_id=14813 | |entrez_id=14813 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=GluN2C | + | |gene_alias=GluN2C |
|gene_description="glutamate receptor, ionotropic, NMDA2C (epsilon 3)" | |gene_description="glutamate receptor, ionotropic, NMDA2C (epsilon 3)" | ||
|gene_id=320534 | |gene_id=320534 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=115245262 | |start=115245262 | ||
| + | |start_of_center_position=115245271 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK220084 | |transcript_name=AK220084 | ||
Revision as of 11:56, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115245271 |
|---|---|
| End of the center position in the TSS region: | 115245272 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK220084 |
|---|---|
| Distance: | 304 |
| Num_trans: | 21 |
| All_trans: | AK220084:304 AK210179:-308 AK193026:-312 AK189671:-326 AK202144:-326 AK207970:-326 AK211812:-326 AK214472:-326 AB349270:-360 AK196097:-412 AK203762:-436 AK191682:-449 AK219230:-468 AK207693:-470 AK209579:-470 AK205447:-470 AK190182:-470 AK219640:-470 AK211402:-470 AK211472:-470 AK202321:-470 |
TATA-Box annotation
| Distance to TSS: | 21972 |
|---|---|
| Nearest PromoterID: | NM_010350 |
| Entrez ID: | 14813 |
| Nearest Unigene: | Mm.39090 |
| Nearest Refseq: | NM_010350 |
| Nearest Ensembl: | ENSMUSG00000020734 |
| Gene Name: | transmembrane protein 104 |
| Gene Alias: | GluN2C |
| Gene Description: | "glutamate receptor, ionotropic, NMDA2C (epsilon 3)" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
