Difference between revisions of "TSS:Mm 100064.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000053288.5:17 NM_001080929:17 uc007mhi.1:17 BC144823:147 BC150668:147 |chr=chr11 |cpg_percent=0.115 |distance=17 |distance_to_tss=-33 |end=115...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm21= | ||
|all_trans=ENSMUST00000053288.5:17 NM_001080929:17 uc007mhi.1:17 BC144823:147 BC150668:147 | |all_trans=ENSMUST00000053288.5:17 NM_001080929:17 uc007mhi.1:17 BC144823:147 BC150668:147 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=-33 | |distance_to_tss=-33 | ||
|end=115381899 | |end=115381899 | ||
| + | |end_of_center_position=115381884 | ||
|entrez_id=237988 | |entrez_id=237988 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=D030068L24Rik | + | |gene_alias=D030068L24Rik |
|gene_description=cerebellar degeneration-related protein 2-like | |gene_description=cerebellar degeneration-related protein 2-like | ||
|gene_id=237988 | |gene_id=237988 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115381867 | |start=115381867 | ||
| + | |start_of_center_position=115381883 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000053288.5 NM_001080929 uc007mhi.1 | |transcript_name=ENSMUST00000053288.5 NM_001080929 uc007mhi.1 | ||
Revision as of 11:57, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115381883 |
|---|---|
| End of the center position in the TSS region: | 115381884 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000053288.5 NM_001080929 uc007mhi.1 |
|---|---|
| Distance: | 17 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000053288.5:17 NM_001080929:17 uc007mhi.1:17 BC144823:147 BC150668:147 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NM_001080929 |
| Entrez ID: | 237988 |
| Nearest Unigene: | Mm.102872 |
| Nearest Refseq: | NM_001080929 |
| Nearest Ensembl: | ENSMUSG00000050910 |
| Gene Name: | cerebellar degeneration-related protein 2-like |
| Gene Alias: | D030068L24Rik |
| Gene Description: | cerebellar degeneration-related protein 2-like |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
