Difference between revisions of "TSS:Mm 100066.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK051090:-2 |chr=chr11 |cpg_percent=0 |distance=-2 |distance_to_tss=-9113 |end=115394642 |entrez_id=68572 |gc_percent=0.462687 |gene_alias=1110001A02Rik...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |1110002E03Rik= | ||
| + | |Ict1= | ||
| + | |MRP-L58= | ||
|all_trans=AK051090:-2 | |all_trans=AK051090:-2 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-9113 | |distance_to_tss=-9113 | ||
|end=115394642 | |end=115394642 | ||
| + | |end_of_center_position=115394640 | ||
|entrez_id=68572 | |entrez_id=68572 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=1110001A02Rik | + | |gene_alias=1110001A02Rik |
|gene_description=mitochondrial ribosomal protein L58 | |gene_description=mitochondrial ribosomal protein L58 | ||
|gene_id=237988 | |gene_id=237988 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=115394636 | |start=115394636 | ||
| + | |start_of_center_position=115394639 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK051090 | |transcript_name=AK051090 | ||
Revision as of 11:57, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115394639 |
|---|---|
| End of the center position in the TSS region: | 115394640 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK051090 |
|---|---|
| Distance: | -2 |
| Num_trans: | 1 |
| All_trans: | AK051090:-2 |
TATA-Box annotation
| Distance to TSS: | -9113 |
|---|---|
| Nearest PromoterID: | NM_001347645 |
| Entrez ID: | 68572 |
| Nearest Unigene: | Mm.271062 |
| Nearest Refseq: | NM_026729 |
| Nearest Ensembl: | ENSMUSG00000018858 |
| Gene Name: | cerebellar degeneration-related protein 2-like |
| Gene Alias: | 1110001A02Rik |
| Gene Description: | mitochondrial ribosomal protein L58 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
