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Difference between revisions of "TSS:Mm 100067.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000153983.7:0 ENSMUST00000106539.9:0 ENSMUST00000103036.4:0 ENSMUST00000128632.7:0 ENSMUST00000122946.7:0 ENSMUST00000133192.1:0 NM_026729:0 uc...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|1110002E03Rik=
 +
|Ict1=
 +
|MRP-L58=
 
|all_trans=ENSMUST00000153983.7:0 ENSMUST00000106539.9:0 ENSMUST00000103036.4:0 ENSMUST00000128632.7:0 ENSMUST00000122946.7:0 ENSMUST00000133192.1:0 NM_026729:0 uc007mhj.1:0 uc007mhk.1:0 uc007mhl.1:0 BC028523:0 BC079614:0 AK003192:0 ENSMUST00000135619.7:5 DQ713646:29 ENSMUST00000021079.13:45 AK003286:105
 
|all_trans=ENSMUST00000153983.7:0 ENSMUST00000106539.9:0 ENSMUST00000103036.4:0 ENSMUST00000128632.7:0 ENSMUST00000122946.7:0 ENSMUST00000133192.1:0 NM_026729:0 uc007mhj.1:0 uc007mhk.1:0 uc007mhl.1:0 BC028523:0 BC079614:0 AK003192:0 ENSMUST00000135619.7:5 DQ713646:29 ENSMUST00000021079.13:45 AK003286:105
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=4
 
|distance_to_tss=4
 
|end=115403777
 
|end=115403777
 +
|end_of_center_position=115403756
 
|entrez_id=68572
 
|entrez_id=68572
 
|gc_percent=0.691542
 
|gc_percent=0.691542
−
|gene_alias=1110001A02Rik|1110002E03Rik|Ict1|MRP-L58
+
|gene_alias=1110001A02Rik
 
|gene_description=mitochondrial ribosomal protein L58
 
|gene_description=mitochondrial ribosomal protein L58
 
|gene_id=68572
 
|gene_id=68572
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|species=mouse
 
|species=mouse
 
|start=115403734
 
|start=115403734
 +
|start_of_center_position=115403755
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000153983.7 ENSMUST00000106539.9 ENSMUST00000103036.4 ENSMUST00000128632.7 ENSMUST00000122946.7 ENSMUST00000133192.1 NM_026729 uc007mhj.1 uc007mhk.1 uc007mhl.1 BC028523 BC079614 AK003192
 
|transcript_name=ENSMUST00000153983.7 ENSMUST00000106539.9 ENSMUST00000103036.4 ENSMUST00000128632.7 ENSMUST00000122946.7 ENSMUST00000133192.1 NM_026729 uc007mhj.1 uc007mhk.1 uc007mhl.1 BC028523 BC079614 AK003192

Revision as of 11:58, 12 May 2019

Basic information about the TSS

TSS ID:mm_100067.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115403734
End:115403777
Strand:+
TSS Score:1
Start of the center position in the TSS region:115403755
End of the center position in the TSS region:115403756



Gene and protein annotation

Transcript_name:ENSMUST00000153983.7 ENSMUST00000106539.9 ENSMUST00000103036.4 ENSMUST00000128632.7 ENSMUST00000122946.7 ENSMUST00000133192.1 NM_026729 uc007mhj.1 uc007mhk.1 uc007mhl.1 BC028523 BC079614 AK003192
Distance:0
GeneID:68572
HGNC/MGI_ID:MGI:1915822
UniProt_ID:A2A6T4 D6RHR8 Q8R035 Q8R035-2
Gene_name:immature colon carcinoma transcript 1
Gene_symbol:Ict1
Gene_synonyms:1110001A02Rik 1110002E03Rik
Gene_source:MGI:1915822



Transcript annotation

Transcript_name:ENSMUST00000153983.7 ENSMUST00000106539.9 ENSMUST00000103036.4 ENSMUST00000128632.7 ENSMUST00000122946.7 ENSMUST00000133192.1 NM_026729 uc007mhj.1 uc007mhk.1 uc007mhl.1 BC028523 BC079614 AK003192
Distance:0
Num_trans:17
All_trans:ENSMUST00000153983.7:0 ENSMUST00000106539.9:0 ENSMUST00000103036.4:0 ENSMUST00000128632.7:0 ENSMUST00000122946.7:0 ENSMUST00000133192.1:0 NM_026729:0 uc007mhj.1:0 uc007mhk.1:0 uc007mhl.1:0 BC028523:0 BC079614:0 AK003192:0 ENSMUST00000135619.7:5 DQ713646:29 ENSMUST00000021079.13:45 AK003286:105



TATA-Box annotation

Distance to TSS:4
Nearest PromoterID:NM_001347645
Entrez ID:68572
Nearest Unigene:Mm.271062
Nearest Refseq:NM_026729
Nearest Ensembl:ENSMUSG00000018858
Gene Name:immature colon carcinoma transcript 1
Gene Alias:1110001A02Rik
Gene Description:mitochondrial ribosomal protein L58
Gene Type:protein-coding
CpG%:0.11
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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