Difference between revisions of "TSS:Mm 100078.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000133636.7:16 uc007mhr.1:16 BC052932:16 BC053982:16 ENSMUST00000140567.1:31 ENSMUST00000139318.7:34 ENSMUST00000146500.1:40 |chr=chr11 |cpg_pe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MCT 5= | ||
| + | |MCT 6= | ||
| + | |MCT5= | ||
|all_trans=ENSMUST00000133636.7:16 uc007mhr.1:16 BC052932:16 BC053982:16 ENSMUST00000140567.1:31 ENSMUST00000139318.7:34 ENSMUST00000146500.1:40 | |all_trans=ENSMUST00000133636.7:16 uc007mhr.1:16 BC052932:16 BC053982:16 ENSMUST00000140567.1:31 ENSMUST00000139318.7:34 ENSMUST00000146500.1:40 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=1303 | |distance_to_tss=1303 | ||
|end=115463784 | |end=115463784 | ||
| + | |end_of_center_position=115463776 | ||
|entrez_id=217316 | |entrez_id=217316 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=A130015N09Rik | + | |gene_alias=A130015N09Rik |
|gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 5" | |gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 5" | ||
|gene_id=217316 | |gene_id=217316 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=115463767 | |start=115463767 | ||
| + | |start_of_center_position=115463775 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000133636.7 uc007mhr.1 BC052932 BC053982 | |transcript_name=ENSMUST00000133636.7 uc007mhr.1 BC052932 BC053982 | ||
Revision as of 12:00, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115463775 |
|---|---|
| End of the center position in the TSS region: | 115463776 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000133636.7 uc007mhr.1 BC052932 BC053982 |
|---|---|
| Distance: | 16 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000133636.7:16 uc007mhr.1:16 BC052932:16 BC053982:16 ENSMUST00000140567.1:31 ENSMUST00000139318.7:34 ENSMUST00000146500.1:40 |
TATA-Box annotation
| Distance to TSS: | 1303 |
|---|---|
| Nearest PromoterID: | NM_001080934 |
| Entrez ID: | 217316 |
| Nearest Unigene: | Mm.25773 |
| Nearest Refseq: | NM_001080934 |
| Nearest Ensembl: | ENSMUSG00000045775 |
| Gene Name: | "solute carrier family 16 (monocarboxylic acid transporters), member 5" |
| Gene Alias: | A130015N09Rik |
| Gene Description: | "solute carrier family 16 (monocarboxylic acid transporters), member 5" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
