Difference between revisions of "TSS:Mm 100090.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001002929:0 uc007mhx.2:0 AK039186:0 BC079856:0 AK017632:0 ENSMUST00000021085.10:-4 ENSMUST00000135893.1:35 AF498263:40 |chr=chr11 |cpg_percent=0.09 |...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
|end=115564490 | |end=115564490 | ||
| + | |end_of_center_position=115564464 | ||
|entrez_id=445007 | |entrez_id=445007 | ||
| + | |frount= | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=Pcnt1 | + | |gene_alias=Pcnt1 |
|gene_description=nucleoporin 85 | |gene_description=nucleoporin 85 | ||
|gene_id=445007 | |gene_id=445007 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115564437 | |start=115564437 | ||
| + | |start_of_center_position=115564463 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001002929 uc007mhx.2 AK039186 BC079856 AK017632 | |transcript_name=NM_001002929 uc007mhx.2 AK039186 BC079856 AK017632 | ||
Revision as of 12:02, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115564463 |
|---|---|
| End of the center position in the TSS region: | 115564464 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001002929 uc007mhx.2 AK039186 BC079856 AK017632 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | NM_001002929:0 uc007mhx.2:0 AK039186:0 BC079856:0 AK017632:0 ENSMUST00000021085.10:-4 ENSMUST00000135893.1:35 AF498263:40 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001002929 |
| Entrez ID: | 445007 |
| Nearest Unigene: | Mm.4379 |
| Nearest Refseq: | NM_001002929 |
| Nearest Ensembl: | ENSMUSG00000020739 |
| Gene Name: | nucleoporin 85 |
| Gene Alias: | Pcnt1 |
| Gene Description: | nucleoporin 85 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
