Difference between revisions of "TSS:Mm 100224.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000127090.7:0 ENSMUST00000021177.14:0 NR_029459:0 NM_001166506:0 NM_001166507:0 NM_028777:0 uc007mmz.2:0 uc007mna.2:0 uc007mnb.2:0 uc011yih.1:0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2810012L19Rik= | ||
| + | |Naa-35= | ||
|all_trans=ENSMUST00000127090.7:0 ENSMUST00000021177.14:0 NR_029459:0 NM_001166506:0 NM_001166507:0 NM_028777:0 uc007mmz.2:0 uc007mna.2:0 uc007mnb.2:0 uc011yih.1:0 uc007mnc.2:0 AK047396:0 ENSMUST00000103026.9:52 ENSMUST00000090433.5:52 BC005766:52 BC086620:52 AK004818:63 ENSMUST00000146585.1:66 BC055849:66 | |all_trans=ENSMUST00000127090.7:0 ENSMUST00000021177.14:0 NR_029459:0 NM_001166506:0 NM_001166507:0 NM_028777:0 uc007mmz.2:0 uc007mna.2:0 uc007mnb.2:0 uc011yih.1:0 uc007mnc.2:0 AK047396:0 ENSMUST00000103026.9:52 ENSMUST00000090433.5:52 BC005766:52 BC086620:52 AK004818:63 ENSMUST00000146585.1:66 BC055849:66 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=117115186 | |end=117115186 | ||
| + | |end_of_center_position=117115160 | ||
|entrez_id=74136 | |entrez_id=74136 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=1200017E04Rik | + | |gene_alias=1200017E04Rik |
|gene_description=SEC14-like lipid binding 1 | |gene_description=SEC14-like lipid binding 1 | ||
|gene_id=74136 | |gene_id=74136 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=117115133 | |start=117115133 | ||
| + | |start_of_center_position=117115159 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000127090.7 ENSMUST00000021177.14 NR_029459 NM_001166506 NM_001166507 NM_028777 uc007mmz.2 uc007mna.2 uc007mnb.2 uc011yih.1 uc007mnc.2 AK047396 | |transcript_name=ENSMUST00000127090.7 ENSMUST00000021177.14 NR_029459 NM_001166506 NM_001166507 NM_028777 uc007mmz.2 uc007mna.2 uc007mnb.2 uc011yih.1 uc007mnc.2 AK047396 | ||
Revision as of 12:31, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117115159 |
|---|---|
| End of the center position in the TSS region: | 117115160 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000127090.7 ENSMUST00000021177.14 NR_029459 NM_001166506 NM_001166507 NM_028777 uc007mmz.2 uc007mna.2 uc007mnb.2 uc011yih.1 uc007mnc.2 AK047396 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENSMUST00000127090.7:0 ENSMUST00000021177.14:0 NR_029459:0 NM_001166506:0 NM_001166507:0 NM_028777:0 uc007mmz.2:0 uc007mna.2:0 uc007mnb.2:0 uc011yih.1:0 uc007mnc.2:0 AK047396:0 ENSMUST00000103026.9:52 ENSMUST00000090433.5:52 BC005766:52 BC086620:52 AK004818:63 ENSMUST00000146585.1:66 BC055849:66 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NR_029459 |
| Entrez ID: | 74136 |
| Nearest Unigene: | Mm.272312 |
| Nearest Refseq: | NM_028777 |
| Nearest Ensembl: | ENSMUSG00000020823 |
| Gene Name: | SEC14-like lipid binding 1 |
| Gene Alias: | 1200017E04Rik |
| Gene Description: | SEC14-like lipid binding 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
