Difference between revisions of "TSS:Mm 100656.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB341341:31 AB341343:-95 ENSMUST00000081318.12:-234 AK133558:-234 ENSMUST00000144359.7:-238 BC046305:-238 ENSMUST00000138126.7:-248 AK170090:-248 ENSMUS...") |
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|distance_to_tss=313 | |distance_to_tss=313 | ||
|end=3193173 | |end=3193173 | ||
| + | |end_of_center_position=3193151 | ||
|entrez_id=78887 | |entrez_id=78887 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
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|species=mouse | |species=mouse | ||
|start=3193127 | |start=3193127 | ||
| + | |start_of_center_position=3193150 | ||
|strand=- | |strand=- | ||
|transcript_name=AB341341 | |transcript_name=AB341341 | ||
Revision as of 20:14, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3193150 |
|---|---|
| End of the center position in the TSS region: | 3193151 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB341341 |
|---|---|
| Distance: | 31 |
| Num_trans: | 25 |
| All_trans: | AB341341:31 AB341343:-95 ENSMUST00000081318.12:-234 AK133558:-234 ENSMUST00000144359.7:-238 BC046305:-238 ENSMUST00000138126.7:-248 AK170090:-248 ENSMUST00000142315.7:-251 ENSMUST00000118627.1:-251 AK082866:-251 BC106124:-254 AK129159:-257 ENSMUST00000144778.7:-266 BC099677:-266 ENSMUST00000132893.7:-287 AK046135:-287 AK046373:-287 ENSMUST00000066391.13:-290 NM_030207:-290 uc007hrt.1:-290 uc007hru.1:-290 uc007hrx.1:-290 uc007hsa.1:-290 uc007hsb.1:-290 |
TATA-Box annotation
| Distance to TSS: | 313 |
|---|---|
| Nearest PromoterID: | NM_030207 |
| Entrez ID: | 78887 |
| Nearest Unigene: | Mm.394071 |
| Nearest Refseq: | NM_030207 |
| Nearest Ensembl: | ENSMUSG00000023764 |
| Gene Name: | Sfi1 |
| Gene Alias: | - |
| Gene Description: | "Sfi1 homolog, spindle assembly associated (yeast)" |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
