Difference between revisions of "TSS:Mm 100918.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK085849:287 |chr=chr11 |cpg_percent=0.11 |distance=287 |distance_to_tss=-418 |end=6292149 |entrez_id=18293 |gc_percent=0.686567 |gene_alias=2210403E04R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |2210412K19Rik= | ||
| + | |AA409584= | ||
|all_trans=AK085849:287 | |all_trans=AK085849:287 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |d1401= | ||
|distance=287 | |distance=287 | ||
|distance_to_tss=-418 | |distance_to_tss=-418 | ||
|end=6292149 | |end=6292149 | ||
| + | |end_of_center_position=6292141 | ||
|entrez_id=18293 | |entrez_id=18293 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=2210403E04Rik | + | |gene_alias=2210403E04Rik |
|gene_description=oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) | |gene_description=oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) | ||
|gene_name=Ogdh | |gene_name=Ogdh | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA4192= | ||
|nearest_ensembl=ENSMUSG00000020456 | |nearest_ensembl=ENSMUSG00000020456 | ||
|nearest_promoter_id=NM_001252288 | |nearest_promoter_id=NM_001252288 | ||
| Line 19: | Line 24: | ||
|species=mouse | |species=mouse | ||
|start=6292131 | |start=6292131 | ||
| + | |start_of_center_position=6292140 | ||
|strand=- | |strand=- | ||
|transcript_name=AK085849 | |transcript_name=AK085849 | ||
Revision as of 20:57, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6292140 |
|---|---|
| End of the center position in the TSS region: | 6292141 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK085849 |
|---|---|
| Distance: | 287 |
| Num_trans: | 1 |
| All_trans: | AK085849:287 |
TATA-Box annotation
| Distance to TSS: | -418 |
|---|---|
| Nearest PromoterID: | NM_001252288 |
| Entrez ID: | 18293 |
| Nearest Unigene: | Mm.276348 |
| Nearest Refseq: | NM_010956 |
| Nearest Ensembl: | ENSMUSG00000020456 |
| Gene Name: | Ogdh |
| Gene Alias: | 2210403E04Rik |
| Gene Description: | oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
