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Difference between revisions of "TSS:Hg 100257.1"

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Line 23: Line 23:
 
|distance_to_tss=3
 
|distance_to_tss=3
 
|end=21975141
 
|end=21975141
 +
|end_of_center_position=21975131
 
|entrez_id=1029
 
|entrez_id=1029
 
|gc_percent=0.701493
 
|gc_percent=0.701493
|gene_alias=ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16
+
|gene_alias=ARF
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_description=cyclin dependent kinase inhibitor 2A
 
|gene_id=1029
 
|gene_id=1029
Line 41: Line 42:
 
|species=human
 
|species=human
 
|start=21975119
 
|start=21975119
 +
|start_of_center_position=21975130
 
|strand=-
 
|strand=-
 
|transcript_name=NM_000077 NM_001195132
 
|transcript_name=NM_000077 NM_001195132

Revision as of 05:35, 11 May 2019

Basic information about the TSS


TSS ID:hg_100257.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21975119
End:21975141
Strand:-
TSS Score:1
Start of the center position in the TSS region:21975130
End of the center position in the TSS region:21975131



Gene and protein annotation


Transcript_name:NM_000077 NM_001195132
Distance:0
GeneID:1029
HGNC/MGI_ID:HGNC:1787
UniProt_ID:P42771
Gene_name:cyclin-dependent kinase inhibitor 2A
Gene_symbol:CDKN2A
Gene_synonyms:ARF CDK4I CMM2 INK4 INK4a MTS1 p14 p14ARF p16 p16INK4a p19 p19Arf
Gene_source:HGNC:1787



Transcript annotation


Transcript_name:NM_000077 NM_001195132
Distance:0
Num_trans:18
All_trans:NM_000077:0 NM_001195132:0 ENST00000304494.9:22 uc003zpk.4:22 KC814157:253 L27211:253 JQ694043:253 JQ694044:253 JQ694045:253 ENST00000498124.1:254 uc010miu.4:254 DQ318021:254 ENST00000579122.1:262 uc064skb.1:262 ENST00000380151.3:293 NM_058197:293 uc003zpj.4:293 AF115544:293



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_000077
Entrez ID:1029
Nearest Unigene:Hs.512599
Nearest Refseq:NM_000077
Nearest Ensembl:ENSG00000147889
Gene Name:cyclin-dependent kinase inhibitor 2A
Gene Alias:ARF
Gene Description:cyclin dependent kinase inhibitor 2A
Gene Type:protein-coding
CpG%:0.065
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):