Difference between revisions of "TSS:Mm 101281.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK168545:4 AK002404:-12 BC050940:-20 AK008270:-26 AK002395:-32 M29462:-33 AK164785:-34 AK077724:-36 uc029rkv.1:-38 AK046369:-38 AK005237:-50 NM_00131667...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D17921= | ||
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
|all_trans=AK168545:4 AK002404:-12 BC050940:-20 AK008270:-26 AK002395:-32 M29462:-33 AK164785:-34 AK077724:-36 uc029rkv.1:-38 AK046369:-38 AK005237:-50 NM_001316675:-154 NM_008618:-154 uc007idv.2:-154 ENSMUST00000102874.10:-413 | |all_trans=AK168545:4 AK002404:-12 BC050940:-20 AK008270:-26 AK002395:-32 M29462:-33 AK164785:-34 AK077724:-36 uc029rkv.1:-38 AK046369:-38 AK005237:-50 NM_001316675:-154 NM_008618:-154 uc007idv.2:-154 ENSMUST00000102874.10:-413 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=157 | |distance_to_tss=157 | ||
|end=21571780 | |end=21571780 | ||
| + | |end_of_center_position=21571778 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik |
|gene_description="malate dehydrogenase 1, NAD (soluble)" | |gene_description="malate dehydrogenase 1, NAD (soluble)" | ||
|gene_id=17449 | |gene_id=17449 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=21571774 | |start=21571774 | ||
| + | |start_of_center_position=21571777 | ||
|strand=- | |strand=- | ||
|transcript_name=AK168545 | |transcript_name=AK168545 | ||
Revision as of 22:07, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21571777 |
|---|---|
| End of the center position in the TSS region: | 21571778 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK168545 |
|---|---|
| Distance: | 4 |
| Num_trans: | 15 |
| All_trans: | AK168545:4 AK002404:-12 BC050940:-20 AK008270:-26 AK002395:-32 M29462:-33 AK164785:-34 AK077724:-36 uc029rkv.1:-38 AK046369:-38 AK005237:-50 NM_001316675:-154 NM_008618:-154 uc007idv.2:-154 ENSMUST00000102874.10:-413 |
TATA-Box annotation
| Distance to TSS: | 157 |
|---|---|
| Nearest PromoterID: | NM_008618 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Alias: | B230377B03Rik |
| Gene Description: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
