Difference between revisions of "TSS:Mm 101417.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0 |distance= |distance_to_tss=-28164 |end=29346011 |entrez_id=108686 |gc_percent=0.457711 |gene_alias=A430106J12Rik|AI848406|Ape|C130096N06...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AI848406= | ||
| + | |Ape= | ||
| + | |C130096N06Rik= | ||
| + | |C330012F17Rik= | ||
| + | |D130005J21Rik= | ||
| + | |Girdin= | ||
| + | |Giv= | ||
| + | |Grdn= | ||
| + | |Hkrp1= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 5: | Line 14: | ||
|distance_to_tss=-28164 | |distance_to_tss=-28164 | ||
|end=29346011 | |end=29346011 | ||
| + | |end_of_center_position=29346009 | ||
|entrez_id=108686 | |entrez_id=108686 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=A430106J12Rik | + | |gene_alias=A430106J12Rik |
|gene_description=coiled coil domain containing 88A | |gene_description=coiled coil domain containing 88A | ||
|gene_name=Ccdc88a | |gene_name=Ccdc88a | ||
| Line 18: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=29346005 | |start=29346005 | ||
| + | |start_of_center_position=29346008 | ||
|strand=- | |strand=- | ||
|tata_box="-33(GAGTATAAATAG,-,0.00)" | |tata_box="-33(GAGTATAAATAG,-,0.00)" | ||
Revision as of 22:34, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29346008 |
|---|---|
| End of the center position in the TSS region: | 29346009 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -28164 |
|---|---|
| Nearest PromoterID: | NM_176841 |
| Entrez ID: | 108686 |
| Nearest Unigene: | Mm.338284 |
| Nearest Refseq: | NM_176841 |
| Nearest Ensembl: | ENSMUSG00000032740 |
| Gene Name: | Ccdc88a |
| Gene Alias: | A430106J12Rik |
| Gene Description: | coiled coil domain containing 88A |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GAGTATAAATAG,-,0.00)" |
