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Difference between revisions of "TSS:Hg 10044.1"

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Line 10: Line 10:
 
|distance_to_tss=4
 
|distance_to_tss=4
 
|end=6485959
 
|end=6485959
 +
|end_of_center_position=6485951
 
|entrez_id=57449
 
|entrez_id=57449
 
|gc_percent=0.681592
 
|gc_percent=0.681592
|gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech
+
|gene_alias=CMTRIC
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_id=57449
 
|gene_id=57449
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=6485941
 
|start=6485941
 +
|start_of_center_position=6485950
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000400913.5 NM_001042665 uc001ank.1 AB097001
 
|transcript_name=ENST00000400913.5 NM_001042665 uc001ank.1 AB097001

Revision as of 16:36, 10 May 2019

Basic information about the TSS


TSS ID:hg_10044.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6485941
End:6485959
Strand:-
TSS Score:1
Start of the center position in the TSS region:6485950
End of the center position in the TSS region:6485951



Gene and protein annotation


Transcript_name:ENST00000400913.5 NM_001042665 uc001ank.1 AB097001
Distance:0
GeneID:57449
HGNC/MGI_ID:HGNC:29105
UniProt_ID:O94827
Gene_name:pleckstrin homology and RhoGEF domain containing G5
Gene_symbol:PLEKHG5
Gene_synonyms:GEF720 KIAA0720 Syx Tech
Gene_source:HGNC:29105



Transcript annotation


Transcript_name:ENST00000400913.5 NM_001042665 uc001ank.1 AB097001
Distance:0
Num_trans:8
All_trans:ENST00000400913.5:0 NM_001042665:0 uc001ank.1:0 AB097001:0 ENST00000535355.5:473 NM_001265593:473 uc010nzr.1:473 AK299523:473



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_001042665
Entrez ID:57449
Nearest Unigene:Hs.284232
Nearest Refseq:NM_020631
Nearest Ensembl:ENSG00000171680
Gene Name:pleckstrin homology and RhoGEF domain containing G5
Gene Alias:CMTRIC
Gene Description:pleckstrin homology and RhoGEF domain containing G5
Gene Type:protein-coding
CpG%:0.03
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):