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Difference between revisions of "TSS:Hg 10052.1"

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Line 10: Line 10:
 
|distance_to_tss=-4
 
|distance_to_tss=-4
 
|end=6497453
 
|end=6497453
 +
|end_of_center_position=6497429
 
|entrez_id=57449
 
|entrez_id=57449
 
|gc_percent=0.885572
 
|gc_percent=0.885572
|gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech
+
|gene_alias=CMTRIC
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_id=57449
 
|gene_id=57449
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=6497403
 
|start=6497403
 +
|start_of_center_position=6497428
 
|strand=-
 
|strand=-
 
|transcript_name=NM_001042663 AB018263
 
|transcript_name=NM_001042663 AB018263

Revision as of 16:37, 10 May 2019

Basic information about the TSS


TSS ID:hg_10052.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6497403
End:6497453
Strand:-
TSS Score:1
Start of the center position in the TSS region:6497428
End of the center position in the TSS region:6497429



Gene and protein annotation


Transcript_name:NM_001042663 AB018263
Distance:0
GeneID:57449
HGNC/MGI_ID:HGNC:29105
UniProt_ID:O94827
Gene_name:pleckstrin homology and RhoGEF domain containing G5
Gene_symbol:PLEKHG5
Gene_synonyms:GEF720 KIAA0720 Syx Tech
Gene_source:HGNC:29105



Transcript annotation


Transcript_name:NM_001042663 AB018263
Distance:0
Num_trans:9
All_trans:NM_001042663:0 AB018263:0 ENST00000400915.7:14 uc001ano.2:14 AK125550:14 ENST00000537245.5:308 NM_001265592:308 uc031plb.1:308 AK294875:308



TATA-Box annotation


Distance to TSS:-4
Nearest PromoterID:NM_001042663
Entrez ID:57449
Nearest Unigene:Hs.284232
Nearest Refseq:NM_020631
Nearest Ensembl:ENSG00000171680
Gene Name:pleckstrin homology and RhoGEF domain containing G5
Gene Alias:CMTRIC
Gene Description:pleckstrin homology and RhoGEF domain containing G5
Gene Type:protein-coding
CpG%:0.18
GC%:0.885572
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):