Personal tools

Difference between revisions of "TSS:Hg 100579.1"

From referenceTSS

Jump to: navigation, search
Line 6: Line 6:
 
|distance_to_tss=0
 
|distance_to_tss=0
 
|end=35115916
 
|end=35115916
 +
|end_of_center_position=35115911
 
|entrez_id=80256
 
|entrez_id=80256
 
|gc_percent=0.621891
 
|gc_percent=0.621891
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=35115905
 
|start=35115905
 +
|start_of_center_position=35115910
 
|strand=-
 
|strand=-
 
|transcript_name=NM_025182 AK307682
 
|transcript_name=NM_025182 AK307682

Revision as of 06:32, 11 May 2019

Basic information about the TSS


TSS ID:hg_100579.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35115905
End:35115916
Strand:-
TSS Score:1
Start of the center position in the TSS region:35115910
End of the center position in the TSS region:35115911



Gene and protein annotation


Transcript_name:NM_025182 AK307682
Distance:0
GeneID:80256
HGNC/MGI_ID:HGNC:25666
UniProt_ID:Q7L5A3
Gene_name:family with sequence similarity 214 member B
Gene_symbol:FAM214B
Gene_synonyms:FLJ11560 bA182N22.6
Gene_source:HGNC:25666



Transcript annotation


Transcript_name:NM_025182 AK307682
Distance:0
Num_trans:16
All_trans:NM_025182:0 AK307682:0 ENST00000322813.9:10 uc003zwo.3:10 BC004406:10 AK021622:28 ENST00000605104.1:44 ENST00000605392.1:44 uc064swl.1:44 uc064swm.1:44 ENST00000378566.5:56 NR_134455:-56 uc003zwn.4:56 AK022837:56 ENST00000605244.5:-425 uc064swj.1:-425



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_025182
Entrez ID:80256
Nearest Unigene:Hs.301696
Nearest Refseq:NM_025182
Nearest Ensembl:ENSG00000005238
Gene Name:family with sequence similarity 214 member B
Gene Alias:KIAA1539
Gene Description:family with sequence similarity 214 member B
Gene Type:protein-coding
CpG%:0.055
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):