Difference between revisions of "TSS:Mm 104809.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000153181.7:0 ENSMUST00000139017.1:0 NR_033551:0 uc007lhl.1:0 uc007lho.1:0 uc056yoi.1:0 AK142978:0 AK164749:0 ENSMUST00000141696.1:22 AK087290:...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
|end=98810102 | |end=98810102 | ||
| + | |end_of_center_position=98810091 | ||
|entrez_id=100037262 | |entrez_id=100037262 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=98810079 | |start=98810079 | ||
| + | |start_of_center_position=98810090 | ||
|strand=- | |strand=- | ||
|tata_box="-87(CCCTCTAAGAGG,-,0.00)" | |tata_box="-87(CCCTCTAAGAGG,-,0.00)" | ||
Revision as of 09:08, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 98810090 |
|---|---|
| End of the center position in the TSS region: | 98810091 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000153181.7 ENSMUST00000139017.1 NR_033551 uc007lhl.1 uc007lho.1 uc056yoi.1 AK142978 AK164749 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000153181.7:0 ENSMUST00000139017.1:0 NR_033551:0 uc007lhl.1:0 uc007lho.1:0 uc056yoi.1:0 AK142978:0 AK164749:0 ENSMUST00000141696.1:22 AK087290:22 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_033551 |
| Entrez ID: | 100037262 |
| Nearest Unigene: | Mm.442062 |
| Nearest Refseq: | NR_033551 |
| Nearest Ensembl: | ENSMUSG00000075576 |
| Gene Name: | predicted gene 12359 |
| Gene Alias: | OTTMUSG00000006457 |
| Gene Description: | predicted gene 12359 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-87(CCCTCTAAGAGG,-,0.00)" |
