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Difference between revisions of "TSS:Hg 100748.1"

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Line 10: Line 10:
 
|distance_to_tss=31
 
|distance_to_tss=31
 
|end=37785082
 
|end=37785082
 +
|end_of_center_position=37785062
 
|entrez_id=51010
 
|entrez_id=51010
 
|gc_percent=0.651741
 
|gc_percent=0.651741
|gene_alias=CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10
+
|gene_alias=CGI-102
 
|gene_description=exosome component 3
 
|gene_description=exosome component 3
 
|gene_id=51010
 
|gene_id=51010
Line 30: Line 31:
 
|species=human
 
|species=human
 
|start=37785040
 
|start=37785040
 +
|start_of_center_position=37785061
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000465229.5 ENST00000327304.9 ENST00000396521.3 uc064tdg.1 uc004aal.4 uc004aam.4 AK289571 AK290864 BC002437 BC008880 AF281132 CU679169 KJ893776 KJ898800 DQ891938 DQ895125 AB528623
 
|transcript_name=ENST00000465229.5 ENST00000327304.9 ENST00000396521.3 uc064tdg.1 uc004aal.4 uc004aam.4 AK289571 AK290864 BC002437 BC008880 AF281132 CU679169 KJ893776 KJ898800 DQ891938 DQ895125 AB528623

Revision as of 07:05, 11 May 2019

Basic information about the TSS


TSS ID:hg_100748.1
Species:human
Chr:chr9
TSS Classification:yes
Start:37785040
End:37785082
Strand:-
TSS Score:1
Start of the center position in the TSS region:37785061
End of the center position in the TSS region:37785062



Gene and protein annotation


Transcript_name:ENST00000465229.5 ENST00000327304.9 ENST00000396521.3 uc064tdg.1 uc004aal.4 uc004aam.4 AK289571 AK290864 BC002437 BC008880 AF281132 CU679169 KJ893776 KJ898800 DQ891938 DQ895125 AB528623
Distance:0
GeneID:51010
HGNC/MGI_ID:HGNC:17944
UniProt_ID:Q9NQT5
Gene_name:exosome component 3
Gene_symbol:EXOSC3
Gene_synonyms:CGI-102 RRP40 Rrp40p hRrp-40 hRrp40p p10
Gene_source:HGNC:17944



Transcript annotation


Transcript_name:ENST00000465229.5 ENST00000327304.9 ENST00000396521.3 uc064tdg.1 uc004aal.4 uc004aam.4 AK289571 AK290864 BC002437 BC008880 AF281132 CU679169 KJ893776 KJ898800 DQ891938 DQ895125 AB528623
Distance:0
Num_trans:27
All_trans:ENST00000465229.5:0 ENST00000327304.9:0 ENST00000396521.3:0 uc064tdg.1:0 uc004aal.4:0 uc004aam.4:0 AK289571:0 AK290864:0 BC002437:0 BC008880:0 AF281132:0 CU679169:0 KJ893776:0 KJ898800:0 DQ891938:0 DQ895125:0 AB528623:0 NM_001002269:-10 NM_016042:-10 AF151860:24 AF229833:252 ENST00000465860.5:296 ENST00000496910.1:296 uc064tdl.1:296 uc064tdm.1:296 ENST00000490516.5:328 uc064tdi.1:328



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_001002269
Entrez ID:51010
Nearest Unigene:Hs.602571
Nearest Refseq:NM_016042
Nearest Ensembl:ENSG00000107371
Gene Name:exosome component 3
Gene Alias:CGI-102
Gene Description:exosome component 3
Gene Type:protein-coding
CpG%:0.12
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):