Difference between revisions of "TSS:Hg 102098.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=81 |entrez_id=114987 |gc_percent=0.711443 |gene_alias=- |gene_description=WD repeat domain 31 |gene_name=WDR31 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000461942.5:0 ENST00000465205.2:0 uc004bhf.4:0 uc064vdv.1:0 AL833635:0 BC022982:0 AK074891:0 ENST00000341761.8:-1 uc004bhc.4:-1 AK093240:-1 ENST00000374195.7:-4 uc064vdu.1:-4 BC012352:-4 AK313843:-11 ENST00000374193.8:-14 uc004bhe.4:-14 ENST00000465979.2:-30 uc064vdw.1:-30 NM_001012361:-72 NM_001006615:-72 NR_134677:-72 NM_145241:-72 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=81 | |distance_to_tss=81 | ||
| + | |end=113340268 | ||
|entrez_id=114987 | |entrez_id=114987 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=WD repeat domain 31 | |gene_description=WD repeat domain 31 | ||
| − | |gene_name=WDR31 | + | |gene_id=114987 |
| + | |gene_name=WD repeat domain 31 | ||
| + | |gene_source=HGNC:21421 | ||
| + | |gene_symbol=WDR31 | ||
| + | |gene_synonyms=FLJ35921 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21421 | ||
|nearest_ensembl=ENSG00000148225 | |nearest_ensembl=ENSG00000148225 | ||
|nearest_promoter_id=NM_145241 | |nearest_promoter_id=NM_145241 | ||
|nearest_refseq=NM_145241 | |nearest_refseq=NM_145241 | ||
|nearest_unigene=Hs.133331 | |nearest_unigene=Hs.133331 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=113340250 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000461942.5 ENST00000465205.2 uc004bhf.4 uc064vdv.1 AL833635 BC022982 AK074891 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102098.1 | |tss_id=hg_102098.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F8WDK4 Q8NC90 | ||
}} | }} | ||
Revision as of 19:11, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000461942.5 ENST00000465205.2 uc004bhf.4 uc064vdv.1 AL833635 BC022982 AK074891 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000461942.5:0 ENST00000465205.2:0 uc004bhf.4:0 uc064vdv.1:0 AL833635:0 BC022982:0 AK074891:0 ENST00000341761.8:-1 uc004bhc.4:-1 AK093240:-1 ENST00000374195.7:-4 uc064vdu.1:-4 BC012352:-4 AK313843:-11 ENST00000374193.8:-14 uc004bhe.4:-14 ENST00000465979.2:-30 uc064vdw.1:-30 NM_001012361:-72 NM_001006615:-72 NR_134677:-72 NM_145241:-72 |
TATA-Box annotation
| Distance to TSS: | 81 |
|---|---|
| Nearest PromoterID: | NM_145241 |
| Entrez ID: | 114987 |
| Nearest Unigene: | Hs.133331 |
| Nearest Refseq: | NM_145241 |
| Nearest Ensembl: | ENSG00000148225 |
| Gene Name: | WD repeat domain 31 |
| Gene Alias: | - |
| Gene Description: | WD repeat domain 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
