Difference between revisions of "TSS:Hg 101019.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=-153 | |distance_to_tss=-153 | ||
|end=74887879 | |end=74887879 | ||
| + | |end_of_center_position=74887874 | ||
|entrez_id=140803 | |entrez_id=140803 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=CHAK2 | + | |gene_alias=CHAK2 |
|gene_description=transient receptor potential cation channel subfamily M member 6 | |gene_description=transient receptor potential cation channel subfamily M member 6 | ||
|gene_id=140803 | |gene_id=140803 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=74887867 | |start=74887867 | ||
| + | |start_of_center_position=74887873 | ||
|strand=- | |strand=- | ||
|tata_box="-81(GGCTGTAAAAGG,-,0.00)" | |tata_box="-81(GGCTGTAAAAGG,-,0.00)" | ||
Revision as of 07:58, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74887873 |
|---|---|
| End of the center position in the TSS region: | 74887874 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF448232 BC156137 |
|---|---|
| Distance: | 12 |
| Num_trans: | 18 |
| All_trans: | AF448232:12 BC156137:12 AY333282:-40 AY333285:-40 AY333286:-40 AY333287:-40 AY333288:-40 ENST00000449912.6:148 NM_001177310:148 uc022bib.1:148 AY333283:148 ENST00000360774.5:-215 ENST00000359047.2:-215 NM_017662:-215 uc004ajl.1:-215 uc004ajn.2:-215 AF350881:-215 AK057748:-215 |
TATA-Box annotation
| Distance to TSS: | -153 |
|---|---|
| Nearest PromoterID: | NM_001177310 |
| Entrez ID: | 140803 |
| Nearest Unigene: | Hs.272225 |
| Nearest Refseq: | NM_017662 |
| Nearest Ensembl: | ENSG00000119121 |
| Gene Name: | transient receptor potential cation channel subfamily M member 6 |
| Gene Alias: | CHAK2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-81(GGCTGTAAAAGG,-,0.00)" |
