Difference between revisions of "TSS:Hg 101134.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=83267273 | |end=83267273 | ||
| + | |end_of_center_position=83267252 | ||
|entrez_id=257019 | |entrez_id=257019 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=4.1O | + | |gene_alias=4.1O |
|gene_description=FERM domain containing 3 | |gene_description=FERM domain containing 3 | ||
|gene_id=257019 | |gene_id=257019 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=83267230 | |start=83267230 | ||
| + | |start_of_center_position=83267251 | ||
|strand=- | |strand=- | ||
|tata_box="29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00)" | |tata_box="29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00)" | ||
Revision as of 08:23, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83267251 |
|---|---|
| End of the center position in the TSS region: | 83267252 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000328788.5 NM_001244962 uc004amq.1 BC023560 |
|---|---|
| Distance: | -14 |
| Num_trans: | 6 |
| All_trans: | ENST00000328788.5:-14 NM_001244962:-14 uc004amq.1:-14 BC023560:-14 GQ129452:52 KJ906467:53 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_001244962 |
| Entrez ID: | 257019 |
| Nearest Unigene: | Hs.127535 |
| Nearest Refseq: | NM_174938 |
| Nearest Ensembl: | ENSG00000172159 |
| Gene Name: | FERM domain containing 3 |
| Gene Alias: | 4.1O |
| Gene Description: | FERM domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "29(GTCCTTTAAAAC,-,0.00),31(CCTTTAAAACAG,+,0.00)" |
