Difference between revisions of "TSS:Hg 102127.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=173 |entrez_id=259 |gc_percent=0.597015 |gene_alias=A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI |gene_description=alpha-1-microg...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EDC1= | ||
| + | |HCP= | ||
| + | |HI30= | ||
| + | |IATIL= | ||
| + | |ITI= | ||
| + | |ITIL= | ||
| + | |ITILC= | ||
| + | |UTI= | ||
| + | |all_trans=AK290837:0 X04225:9 ENST00000603230.1:-20 uc064vfo.1:-20 AK310791:-20 AY544123:21 X04494:36 AB463406:78 HQ448440:80 KJ890666:80 CU692002:80 AK310776:-91 BC041593:-127 ENST00000265132.7:-164 NM_001633:-164 uc004bie.5:-164 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=173 | |distance_to_tss=173 | ||
| + | |end=114078308 | ||
|entrez_id=259 | |entrez_id=259 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI | |gene_alias=A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI | ||
|gene_description=alpha-1-microglobulin/bikunin precursor | |gene_description=alpha-1-microglobulin/bikunin precursor | ||
| − | |gene_name=AMBP | + | |gene_id=259 |
| + | |gene_name=alpha-1-microglobulin/bikunin precursor | ||
| + | |gene_source=HGNC:453 | ||
| + | |gene_symbol=AMBP | ||
| + | |gene_synonyms=EDC1 HCP HI30 IATIL ITILC UTI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:453 | ||
|nearest_ensembl=ENSG00000106927 | |nearest_ensembl=ENSG00000106927 | ||
|nearest_promoter_id=NM_001633 | |nearest_promoter_id=NM_001633 | ||
|nearest_refseq=NM_001633 | |nearest_refseq=NM_001633 | ||
|nearest_unigene=Hs.436911 | |nearest_unigene=Hs.436911 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=114078289 | ||
| + | |strand=- | ||
| + | |transcript_name=AK290837 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102127.1 | |tss_id=hg_102127.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK290837 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | AK290837:0 X04225:9 ENST00000603230.1:-20 uc064vfo.1:-20 AK310791:-20 AY544123:21 X04494:36 AB463406:78 HQ448440:80 KJ890666:80 CU692002:80 AK310776:-91 BC041593:-127 ENST00000265132.7:-164 NM_001633:-164 uc004bie.5:-164 |
TATA-Box annotation
| Distance to TSS: | 173 |
|---|---|
| Nearest PromoterID: | NM_001633 |
| Entrez ID: | 259 |
| Nearest Unigene: | Hs.436911 |
| Nearest Refseq: | NM_001633 |
| Nearest Ensembl: | ENSG00000106927 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | A1M |
| Gene Description: | alpha-1-microglobulin/bikunin precursor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
