Difference between revisions of "TSS:Hg 101221.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=86354507 | |end=86354507 | ||
| + | |end_of_center_position=86354466 | ||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=PAPD6 | + | |gene_alias=PAPD6 |
|gene_description=zinc finger CCHC-type containing 6 | |gene_description=zinc finger CCHC-type containing 6 | ||
|gene_id=79670 | |gene_id=79670 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=86354424 | |start=86354424 | ||
| + | |start_of_center_position=86354465 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000375960.6 NM_024617 NM_001185074 NM_001185059 uc004aot.4 AL832026 CR933643 BX641077 BC111003 | |transcript_name=ENST00000375960.6 NM_024617 NM_001185074 NM_001185059 uc004aot.4 AL832026 CR933643 BX641077 BC111003 | ||
Revision as of 08:42, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 86354465 |
|---|---|
| End of the center position in the TSS region: | 86354466 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375960.6 NM_024617 NM_001185074 NM_001185059 uc004aot.4 AL832026 CR933643 BX641077 BC111003 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000375960.6:0 NM_024617:0 NM_001185074:0 NM_001185059:0 uc004aot.4:0 AL832026:0 CR933643:0 BX641077:0 BC111003:0 CR933644:11 ENST00000375963.7:13 uc004aoq.4:13 AK055546:13 ENST00000277141.10:15 uc064ubw.1:15 AL832193:15 CR936608:15 BC032456:31 AK308352:83 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_001330718 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | zinc finger CCHC-type containing 6 |
| Gene Alias: | PAPD6 |
| Gene Description: | zinc finger CCHC-type containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
