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Difference between revisions of "TSS:Hg 101423.1"

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Line 8: Line 8:
 
|distance_to_tss=109
 
|distance_to_tss=109
 
|end=92404592
 
|end=92404592
 +
|end_of_center_position=92404590
 
|entrez_id=4969
 
|entrez_id=4969
 
|gc_percent=0.427861
 
|gc_percent=0.427861
|gene_alias=OG|OIF|SLRR3A
+
|gene_alias=OG
 
|gene_description=osteoglycin
 
|gene_description=osteoglycin
 
|gene_id=4969
 
|gene_id=4969
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=92404587
 
|start=92404587
 +
|start_of_center_position=92404589
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000375561.9 uc004asa.4
 
|transcript_name=ENST00000375561.9 uc004asa.4

Revision as of 09:19, 11 May 2019

Basic information about the TSS


TSS ID:hg_101423.1
Species:human
Chr:chr9
TSS Classification:yes
Start:92404587
End:92404592
Strand:-
TSS Score:1
Start of the center position in the TSS region:92404589
End of the center position in the TSS region:92404590



Gene and protein annotation


Transcript_name:ENST00000375561.9 uc004asa.4
Distance:-21
GeneID:4969
HGNC/MGI_ID:HGNC:8126
UniProt_ID:A8K0R3 P20774
Gene_name:osteoglycin
Gene_symbol:OGN
Gene_synonyms:OIF SLRR3A mimecan
Gene_source:HGNC:8126



Transcript annotation


Transcript_name:ENST00000375561.9 uc004asa.4
Distance:-21
Num_trans:13
All_trans:ENST00000375561.9:-21 uc004asa.4:-21 ENST00000262551.8:29 uc004asb.4:29 AF086912:42 AF100758:42 ENST00000447356.1:-104 uc064uiq.1:-104 AK289628:-104 NM_024416:-107 NM_033014:-107 NM_014057:-107 AK295433:-107



TATA-Box annotation


Distance to TSS:109
Nearest PromoterID:NM_014057
Entrez ID:4969
Nearest Unigene:Hs.109439
Nearest Refseq:NM_014057
Nearest Ensembl:ENSG00000106809
Gene Name:osteoglycin
Gene Alias:OG
Gene Description:osteoglycin
Gene Type:protein-coding
CpG%:0.005
GC%:0.427861
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):