Difference between revisions of "TSS:Hg 101775.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=135525 | |distance_to_tss=135525 | ||
|end=102655166 | |end=102655166 | ||
| + | |end_of_center_position=102655162 | ||
|entrez_id=414319 | |entrez_id=414319 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=C9orf107 | + | |gene_alias=C9orf107 |
|gene_description=long intergenic non-protein coding RNA 587 | |gene_description=long intergenic non-protein coding RNA 587 | ||
|gene_name=LINC00587 | |gene_name=LINC00587 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=102655157 | |start=102655157 | ||
| + | |start_of_center_position=102655161 | ||
|strand=- | |strand=- | ||
|tata_box="-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)" | |tata_box="-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)" | ||
Revision as of 10:35, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 102655161 |
|---|---|
| End of the center position in the TSS region: | 102655162 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 135525 |
|---|---|
| Nearest PromoterID: | NR_103830 |
| Entrez ID: | 414319 |
| Nearest Unigene: | Hs.385790 |
| Nearest Refseq: | NR_103830 |
| Nearest Ensembl: | ENSG00000204250 |
| Gene Name: | LINC00587 |
| Gene Alias: | C9orf107 |
| Gene Description: | long intergenic non-protein coding RNA 587 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GGTTTTATAAGG,-,0.00),17(CGCCATATAGGA,-,0.00)" |
