Difference between revisions of "TSS:Hg 102188.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=136 |entrez_id=944 |gc_percent=0.517413 |gene_alias=CD153|CD30L|CD30LG|TNLG3A |gene_description=tumor necrosis factor superfami...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD30L= | ||
| + | |CD30LG= | ||
| + | |TNLG3A= | ||
| + | |all_trans=ENST00000223795.2:37 uc004bji.3:37 L09753:37 BC111939:77 BC093630:77 ENST00000618336.4:-131 NM_001252290:-131 NM_001244:-131 uc022bmi.1:-131 AK313619:-131 KJ890862:151 AB590754:151 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=37 | ||
|distance_to_tss=136 | |distance_to_tss=136 | ||
| + | |end=114930464 | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=CD153|CD30L|CD30LG|TNLG3A | |gene_alias=CD153|CD30L|CD30LG|TNLG3A | ||
|gene_description=tumor necrosis factor superfamily member 8 | |gene_description=tumor necrosis factor superfamily member 8 | ||
| − | |gene_name=TNFSF8 | + | |gene_id=944 |
| + | |gene_name=tumor necrosis factor superfamily member 8 | ||
| + | |gene_source=HGNC:11938 | ||
| + | |gene_symbol=TNFSF8 | ||
| + | |gene_synonyms=CD153 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11938 | ||
|nearest_ensembl=ENSG00000106952 | |nearest_ensembl=ENSG00000106952 | ||
|nearest_promoter_id=NM_001244 | |nearest_promoter_id=NM_001244 | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=114930453 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000223795.2 uc004bji.3 L09753 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102188.1 | |tss_id=hg_102188.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q52M88 | ||
}} | }} | ||
Revision as of 19:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000223795.2 uc004bji.3 L09753 |
|---|---|
| Distance: | 37 |
| Num_trans: | 12 |
| All_trans: | ENST00000223795.2:37 uc004bji.3:37 L09753:37 BC111939:77 BC093630:77 ENST00000618336.4:-131 NM_001252290:-131 NM_001244:-131 uc022bmi.1:-131 AK313619:-131 KJ890862:151 AB590754:151 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | tumor necrosis factor superfamily member 8 |
| Gene Alias: | CD153 |
| Gene Description: | tumor necrosis factor superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
