Difference between revisions of "TSS:Hg 101872.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=123 | |distance_to_tss=123 | ||
|end=109013477 | |end=109013477 | ||
| + | |end_of_center_position=109013472 | ||
|entrez_id=8727 | |entrez_id=8727 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=ACRP | + | |gene_alias=ACRP |
|gene_description=catenin alpha like 1 | |gene_description=catenin alpha like 1 | ||
|gene_id=8727 | |gene_id=8727 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=109013465 | |start=109013465 | ||
| + | |start_of_center_position=109013471 | ||
|strand=- | |strand=- | ||
|transcript_name=BC117208 BC117234 | |transcript_name=BC117208 BC117234 | ||
Revision as of 10:59, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109013471 |
|---|---|
| End of the center position in the TSS region: | 109013472 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC117208 BC117234 |
|---|---|
| Distance: | 3 |
| Num_trans: | 22 |
| All_trans: | BC117208:3 BC117234:3 AF080071:-4 AF135021:-7 U97067:-7 AF006070:-7 AF030233:-9 AK314677:-21 AK223230:-22 AK022926:-22 HQ258655:22 AB451283:24 AB451415:24 ENST00000374593.4:-35 uc064uzg.1:-35 ENST00000374595.8:-45 uc004bdp.3:-45 ENST00000325551.8:-52 uc004bdo.3:-52 AK022834:-52 NM_001286974:-117 NM_003798:-117 |
TATA-Box annotation
| Distance to TSS: | 123 |
|---|---|
| Nearest PromoterID: | NM_001286974 |
| Entrez ID: | 8727 |
| Nearest Unigene: | Hs.58488 |
| Nearest Refseq: | NM_003798 |
| Nearest Ensembl: | ENSG00000119326 |
| Gene Name: | catenin alpha like 1 |
| Gene Alias: | ACRP |
| Gene Description: | catenin alpha like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
