Difference between revisions of "TSS:Hg 101874.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
|end=109013551 | |end=109013551 | ||
| + | |end_of_center_position=109013522 | ||
|entrez_id=8727 | |entrez_id=8727 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=ACRP | + | |gene_alias=ACRP |
|gene_description=catenin alpha like 1 | |gene_description=catenin alpha like 1 | ||
|gene_id=8727 | |gene_id=8727 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=109013492 | |start=109013492 | ||
| + | |start_of_center_position=109013521 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000374595.8 ENST00000325551.8 ENST00000374593.4 uc004bdp.3 uc004bdo.3 uc064uzg.1 AK022834 AK223230 AK022926 AK314677 | |transcript_name=ENST00000374595.8 ENST00000325551.8 ENST00000374593.4 uc004bdp.3 uc004bdo.3 uc064uzg.1 AK022834 AK223230 AK022926 AK314677 | ||
Revision as of 10:59, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109013521 |
|---|---|
| End of the center position in the TSS region: | 109013522 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374595.8 ENST00000325551.8 ENST00000374593.4 uc004bdp.3 uc004bdo.3 uc064uzg.1 AK022834 AK223230 AK022926 AK314677 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000374595.8:0 ENST00000325551.8:0 ENST00000374593.4:0 uc004bdp.3:0 uc004bdo.3:0 uc064uzg.1:0 AK022834:0 AK223230:0 AK022926:0 AK314677:0 AF030233:7 AF135021:9 U97067:9 AF006070:9 AF080071:12 BC117208:30 BC117234:30 NM_001286974:-43 NM_003798:-43 HQ258655:49 AB451283:51 AB451415:51 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_001286974 |
| Entrez ID: | 8727 |
| Nearest Unigene: | Hs.58488 |
| Nearest Refseq: | NM_003798 |
| Nearest Ensembl: | ENSG00000119326 |
| Gene Name: | catenin alpha like 1 |
| Gene Alias: | ACRP |
| Gene Description: | catenin alpha like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
