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Difference between revisions of "TSS:Hg 101902.1"

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Line 7: Line 7:
 
|distance_to_tss=31
 
|distance_to_tss=31
 
|end=109429014
 
|end=109429014
 +
|end_of_center_position=109429012
 
|entrez_id=5774
 
|entrez_id=5774
 
|gc_percent=0.482587
 
|gc_percent=0.482587
|gene_alias=PTP-H1|PTPH1
+
|gene_alias=PTP-H1
 
|gene_description="protein tyrosine phosphatase, non-receptor type 3"
 
|gene_description="protein tyrosine phosphatase, non-receptor type 3"
 
|gene_id=5774
 
|gene_id=5774
Line 25: Line 26:
 
|species=human
 
|species=human
 
|start=109429009
 
|start=109429009
 +
|start_of_center_position=109429011
 
|strand=-
 
|strand=-
 
|tata_box="89(TTATTTAAAAGC,-,0.00)"
 
|tata_box="89(TTATTTAAAAGC,-,0.00)"

Revision as of 11:02, 11 May 2019

Basic information about the TSS


TSS ID:hg_101902.1
Species:human
Chr:chr9
TSS Classification:yes
Start:109429009
End:109429014
Strand:-
TSS Score:1
Start of the center position in the TSS region:109429011
End of the center position in the TSS region:109429012



Gene and protein annotation


Transcript_name:NM_001145372 NM_001145371
Distance:-29
GeneID:5774
HGNC/MGI_ID:HGNC:9655
UniProt_ID:Q8N4S3
Gene_name:"protein tyrosine phosphatase, non-receptor type 3"
Gene_symbol:PTPN3
Gene_synonyms:PTPH1
Gene_source:HGNC:9655



Transcript annotation


Transcript_name:NM_001145372 NM_001145371
Distance:-29
Num_trans:5
All_trans:NM_001145372:-29 NM_001145371:-29 AK316118:41 AK296388:41 AK296265:184



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_001145371
Entrez ID:5774
Nearest Unigene:Hs.436429
Nearest Refseq:NM_002829
Nearest Ensembl:ENSG00000070159
Gene Name:"protein tyrosine phosphatase, non-receptor type 3"
Gene Alias:PTP-H1
Gene Description:"protein tyrosine phosphatase, non-receptor type 3"
Gene Type:protein-coding
CpG%:0.02
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"89(TTATTTAAAAGC,-,0.00)"