Difference between revisions of "TSS:Hg 102109.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=-282 | |distance_to_tss=-282 | ||
|end=113410387 | |end=113410387 | ||
| + | |end_of_center_position=113410363 | ||
|entrez_id=257169 | |entrez_id=257169 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=113410337 | |start=113410337 | ||
| + | |start_of_center_position=113410362 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000479871.1 ENST00000374169.7 ENST00000475080.1 uc064veh.1 uc011lxg.3 uc064vei.1 AK074629 AK096050 BC003166 BC004170 AK092840 AK074782 | |transcript_name=ENST00000479871.1 ENST00000374169.7 ENST00000475080.1 uc064veh.1 uc011lxg.3 uc064vei.1 AK074629 AK096050 BC003166 BC004170 AK092840 AK074782 | ||
Revision as of 11:39, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 113410362 |
|---|---|
| End of the center position in the TSS region: | 113410363 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000479871.1 ENST00000374169.7 ENST00000475080.1 uc064veh.1 uc011lxg.3 uc064vei.1 AK074629 AK096050 BC003166 BC004170 AK092840 AK074782 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000479871.1:0 ENST00000374169.7:0 ENST00000475080.1:0 uc064veh.1:0 uc011lxg.3:0 uc064vei.1:0 AK074629:0 AK096050:0 BC003166:0 BC004170:0 AK092840:0 AK074782:0 AF226077:45 AY720898:45 JF432738:45 KJ894010:45 AB527738:45 ENST00000374171.4:-285 uc004bhn.4:-285 AK074762:-285 NR_027261:-288 NM_017443:-362 NM_001278255:-362 |
TATA-Box annotation
| Distance to TSS: | -282 |
|---|---|
| Nearest PromoterID: | NM_001278629 |
| Entrez ID: | 257169 |
| Nearest Unigene: | Hs.632691 |
| Nearest Refseq: | NM_152786 |
| Nearest Ensembl: | ENSG00000157653 |
| Gene Name: | "polymerase (DNA) epsilon 3, accessory subunit" |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 43 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
