Difference between revisions of "TSS:Hg 10222.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-36088 |entrez_id=84275 |gc_percent=0.547264 |gene_alias=BMSC-MCP|PNC1 |gene_description=solute carrier family 25 member 33 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PNC1= | ||
| + | |all_trans=ENST00000441033.1:-84 uc057cat.1:-84 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-84 | ||
|distance_to_tss=-36088 | |distance_to_tss=-36088 | ||
| + | |end=9503387 | ||
|entrez_id=84275 | |entrez_id=84275 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_032315 | |nearest_refseq=NM_032315 | ||
|nearest_unigene=Hs.568613 | |nearest_unigene=Hs.568613 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=9503374 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000441033.1 uc057cat.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10222.1 | |tss_id=hg_10222.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000441033.1 uc057cat.1 |
|---|---|
| Distance: | -84 |
| Num_trans: | 2 |
| All_trans: | ENST00000441033.1:-84 uc057cat.1:-84 |
TATA-Box annotation
| Distance to TSS: | -36088 |
|---|---|
| Nearest PromoterID: | NM_032315 |
| Entrez ID: | 84275 |
| Nearest Unigene: | Hs.568613 |
| Nearest Refseq: | NM_032315 |
| Nearest Ensembl: | ENSG00000171612 |
| Gene Name: | SLC25A33 |
| Gene Alias: | BMSC-MCP |
| Gene Description: | solute carrier family 25 member 33 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
