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Difference between revisions of "TSS:Hg 102164.1"

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Line 10: Line 10:
 
|distance_to_tss=-841
 
|distance_to_tss=-841
 
|end=114504058
 
|end=114504058
 +
|end_of_center_position=114504056
 
|entrez_id=25861
 
|entrez_id=25861
 
|gc_percent=0.427861
 
|gc_percent=0.427861
|gene_alias=CIP98|DFNB31|PDZD7B|USH2D|WI
+
|gene_alias=CIP98
 
|gene_description=whirlin
 
|gene_description=whirlin
 
|gene_id=25861
 
|gene_id=25861
Line 28: Line 29:
 
|species=human
 
|species=human
 
|start=114504053
 
|start=114504053
 +
|start_of_center_position=114504055
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000480518.1 uc064vge.1
 
|transcript_name=ENST00000480518.1 uc064vge.1

Revision as of 11:53, 11 May 2019

Basic information about the TSS


TSS ID:hg_102164.1
Species:human
Chr:chr9
TSS Classification:yes
Start:114504053
End:114504058
Strand:-
TSS Score:1
Start of the center position in the TSS region:114504055
End of the center position in the TSS region:114504056



Gene and protein annotation


Transcript_name:ENST00000480518.1 uc064vge.1
Distance:-281
GeneID:25861
HGNC/MGI_ID:HGNC:16361
UniProt_ID:
Gene_name:"deafness, autosomal recessive 31"
Gene_symbol:DFNB31
Gene_synonyms:CIP98 PDZD7B USH2D WHRN
Gene_source:HGNC:16361



Transcript annotation


Transcript_name:ENST00000480518.1 uc064vge.1
Distance:-281
Num_trans:2
All_trans:ENST00000480518.1:-281 uc064vge.1:-281



TATA-Box annotation


Distance to TSS:-841
Nearest PromoterID:NM_001083885
Entrez ID:25861
Nearest Unigene:Hs.93836
Nearest Refseq:NM_015404
Nearest Ensembl:ENSG00000095397
Gene Name:"deafness, autosomal recessive 31"
Gene Alias:CIP98
Gene Description:whirlin
Gene Type:protein-coding
CpG%:0.005
GC%:0.427861
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):