Difference between revisions of "TSS:Hg 102187.1"
From referenceTSS
| Line 9: | Line 9: | ||
|distance_to_tss=236 | |distance_to_tss=236 | ||
|end=114930361 | |end=114930361 | ||
| + | |end_of_center_position=114930360 | ||
|entrez_id=944 | |entrez_id=944 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=CD153 | + | |gene_alias=CD153 |
|gene_description=tumor necrosis factor superfamily member 8 | |gene_description=tumor necrosis factor superfamily member 8 | ||
|gene_id=944 | |gene_id=944 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=114930357 | |start=114930357 | ||
| + | |start_of_center_position=114930359 | ||
|strand=- | |strand=- | ||
|tata_box="43(GACTATATAAAG,-,0.00)" | |tata_box="43(GACTATATAAAG,-,0.00)" | ||
Revision as of 11:57, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114930359 |
|---|---|
| End of the center position in the TSS region: | 114930360 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC111939 BC093630 |
|---|---|
| Distance: | -16 |
| Num_trans: | 12 |
| All_trans: | BC111939:-16 BC093630:-16 KJ890862:55 AB590754:55 ENST00000223795.2:-56 uc004bji.3:-56 L09753:-56 ENST00000618336.4:-234 NM_001252290:-234 NM_001244:-234 uc022bmi.1:-234 AK313619:-234 |
TATA-Box annotation
| Distance to TSS: | 236 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | tumor necrosis factor superfamily member 8 |
| Gene Alias: | CD153 |
| Gene Description: | tumor necrosis factor superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "43(GACTATATAAAG,-,0.00)" |
