Difference between revisions of "TSS:Hg 102222.1"
From referenceTSS
| Line 13: | Line 13: | ||
|distance_to_tss=102 | |distance_to_tss=102 | ||
|end=115118164 | |end=115118164 | ||
| + | |end_of_center_position=115118155 | ||
|entrez_id=3371 | |entrez_id=3371 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=150-225 | + | |gene_alias=150-225 |
|gene_description=tenascin C | |gene_description=tenascin C | ||
|gene_id=3371 | |gene_id=3371 | ||
| Line 31: | Line 32: | ||
|species=human | |species=human | ||
|start=115118145 | |start=115118145 | ||
| + | |start_of_center_position=115118154 | ||
|strand=- | |strand=- | ||
|tata_box="-34(CGCTATATAAGC,-,0.00)" | |tata_box="-34(CGCTATATAAGC,-,0.00)" | ||
Revision as of 12:03, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115118154 |
|---|---|
| End of the center position in the TSS region: | 115118155 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK304015 X78565 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK304015:0 X78565:0 AB210038:13 ENST00000534839.1:-35 uc064vgz.1:-35 ENST00000535648.5:-93 ENST00000350763.8:-93 NM_002160:-93 uc022bmj.2:-93 uc004bjj.6:-93 |
TATA-Box annotation
| Distance to TSS: | 102 |
|---|---|
| Nearest PromoterID: | NM_002160 |
| Entrez ID: | 3371 |
| Nearest Unigene: | Hs.143250 |
| Nearest Refseq: | NM_002160 |
| Nearest Ensembl: | ENSG00000041982 |
| Gene Name: | tenascin C |
| Gene Alias: | 150-225 |
| Gene Description: | tenascin C |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(CGCTATATAAGC,-,0.00)" |
