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Difference between revisions of "TSS:Hg 102270.1"

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Line 8: Line 8:
 
|distance_to_tss=19
 
|distance_to_tss=19
 
|end=119369465
 
|end=119369465
 +
|end_of_center_position=119369442
 
|entrez_id=1620
 
|entrez_id=1620
 
|gc_percent=0.721393
 
|gc_percent=0.721393
|gene_alias=DBC1|DBCCR1|FAM5A
+
|gene_alias=DBC1
 
|gene_description=BMP/retinoic acid inducible neural specific 1
 
|gene_description=BMP/retinoic acid inducible neural specific 1
 
|gene_id=1620
 
|gene_id=1620
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=119369418
 
|start=119369418
 +
|start_of_center_position=119369441
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000373964.2 NM_014618 uc004bkd.3 AF027734 AK293649 BC021560
 
|transcript_name=ENST00000373964.2 NM_014618 uc004bkd.3 AF027734 AK293649 BC021560

Revision as of 12:18, 11 May 2019

Basic information about the TSS


TSS ID:hg_102270.1
Species:human
Chr:chr9
TSS Classification:yes
Start:119369418
End:119369465
Strand:-
TSS Score:1
Start of the center position in the TSS region:119369441
End of the center position in the TSS region:119369442



Gene and protein annotation


Transcript_name:ENST00000373964.2 NM_014618 uc004bkd.3 AF027734 AK293649 BC021560
Distance:0
GeneID:1620
HGNC/MGI_ID:HGNC:2687
UniProt_ID:B4DEJ0 O60477
Gene_name:BMP/retinoic acid inducible neural specific 1
Gene_symbol:BRINP1
Gene_synonyms:FAM5A
Gene_source:HGNC:2687



Transcript annotation


Transcript_name:ENST00000373964.2 NM_014618 uc004bkd.3 AF027734 AK293649 BC021560
Distance:0
Num_trans:10
All_trans:ENST00000373964.2:0 NM_014618:0 uc004bkd.3:0 AF027734:0 AK293649:0 BC021560:0 ENST00000265922.7:-2 uc004bkc.3:-2 BC065196:5 BC071702:117



TATA-Box annotation


Distance to TSS:19
Nearest PromoterID:NM_014618
Entrez ID:1620
Nearest Unigene:Hs.532316
Nearest Refseq:NM_014618
Nearest Ensembl:ENSG00000078725
Gene Name:BMP/retinoic acid inducible neural specific 1
Gene Alias:DBC1
Gene Description:BMP/retinoic acid inducible neural specific 1
Gene Type:protein-coding
CpG%:0.135
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):