Difference between revisions of "TSS:Hg 102295.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=120580136 | |end=120580136 | ||
| + | |end_of_center_position=120580131 | ||
|entrez_id=55755 | |entrez_id=55755 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=C48 | + | |gene_alias=C48 |
|gene_description=CDK5 regulatory subunit associated protein 2 | |gene_description=CDK5 regulatory subunit associated protein 2 | ||
|gene_id=55755 | |gene_id=55755 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=120580125 | |start=120580125 | ||
| + | |start_of_center_position=120580130 | ||
|strand=- | |strand=- | ||
|transcript_name=BC146782 AB046853 | |transcript_name=BC146782 AB046853 | ||
Revision as of 12:20, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120580130 |
|---|---|
| End of the center position in the TSS region: | 120580131 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC146782 AB046853 |
|---|---|
| Distance: | -3 |
| Num_trans: | 42 |
| All_trans: | BC146782:-3 AB046853:-3 BC019577:-4 AF448860:6 BX537421:-18 ENST00000349780.8:-22 ENST00000360190.8:-22 uc004bkf.5:-22 uc004bkg.5:-22 AL833481:-22 BX537759:-22 AK122913:-23 BX537708:-23 ENST00000360822.7:-34 ENST00000491334.1:-34 NM_001272039:-34 NM_001011649:-34 NR_073554:-34 NR_073557:-34 NM_018249:-34 NR_073558:-34 NR_073555:-34 NR_073556:-34 uc004bkh.2:-34 uc064viw.1:-34 KP294527:-34 ENST00000481266.1:65 uc064viv.1:65 ENST00000473282.6:121 ENST00000480112.5:121 uc064vij.1:121 uc064vik.1:121 BC136275:121 BC143732:121 BC143734:121 BC143755:121 BC143760:121 BC143762:121 BC143753:121 BC143764:121 AB489151:145 DQ581824:149 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NR_073558 |
| Entrez ID: | 55755 |
| Nearest Unigene: | Hs.269560 |
| Nearest Refseq: | NM_018249 |
| Nearest Ensembl: | ENSG00000136861 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | C48 |
| Gene Description: | CDK5 regulatory subunit associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
