Difference between revisions of "TSS:Hg 102383.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=8071 | |distance_to_tss=8071 | ||
|end=122213676 | |end=122213676 | ||
| + | |end_of_center_position=122213669 | ||
|entrez_id=26468 | |entrez_id=26468 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=122213661 | |start=122213661 | ||
| + | |start_of_center_position=122213668 | ||
|strand=- | |strand=- | ||
|tata_box="-87(CGTCATAAAAAG,-,0.00)" | |tata_box="-87(CGTCATAAAAAG,-,0.00)" | ||
Revision as of 12:37, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122213668 |
|---|---|
| End of the center position in the TSS region: | 122213669 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000482062.1 uc064vme.1 |
|---|---|
| Distance: | -217 |
| Num_trans: | 4 |
| All_trans: | ENST00000482062.1:-217 uc064vme.1:-217 ENST00000464484.3:-246 uc064vmf.1:-246 |
TATA-Box annotation
| Distance to TSS: | 8071 |
|---|---|
| Nearest PromoterID: | NM_001242335 |
| Entrez ID: | 26468 |
| Nearest Unigene: | Hs.103137 |
| Nearest Refseq: | NM_014368 |
| Nearest Ensembl: | ENSG00000106852 |
| Gene Name: | LIM homeobox 6 |
| Gene Alias: | LHX6.1 |
| Gene Description: | LIM homeobox 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-87(CGTCATAAAAAG,-,0.00)" |
