Difference between revisions of "TSS:Hg 102251.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=-23 |entrez_id=23245 |gc_percent=0.696517 |gene_alias=bA67K19.1 |gene_description=astrotactin 2 |gene_name=ASTN2 |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000288520.9:0 ENST00000341734.8:0 ENST00000358637.4:0 NM_198188:0 NM_198187:0 NM_001184734:0 NM_198186:0 NM_001184735:0 uc004bjp.3:0 uc004bjq.3:0 uc022bmn.2:0 BC029272:0 AK024064:0 BC010680:0 BC093835:108 BC143289:108 BC143293:108 BC143292:108 BC101667:109 KJ898468:400 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
| + | |end=116687271 | ||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=bA67K19.1 | |gene_alias=bA67K19.1 | ||
|gene_description=astrotactin 2 | |gene_description=astrotactin 2 | ||
| − | |gene_name=ASTN2 | + | |gene_id=23245 |
| + | |gene_name=astrotactin 2 | ||
| + | |gene_source=HGNC:17021 | ||
| + | |gene_symbol=ASTN2 | ||
| + | |gene_synonyms=KIAA0634 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17021 | ||
|nearest_ensembl=ENSG00000148219 | |nearest_ensembl=ENSG00000148219 | ||
|nearest_promoter_id=NM_198186 | |nearest_promoter_id=NM_198186 | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=116687204 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 NM_198188 NM_198187 NM_001184734 NM_198186 NM_001184735 uc004bjp.3 uc004bjq.3 uc022bmn.2 BC029272 AK024064 BC010680 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102251.1 | |tss_id=hg_102251.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KN99 B7ZKP4 B7ZKP5 O75129 X6R5P2 | ||
}} | }} | ||
Revision as of 19:18, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000288520.9 ENST00000341734.8 ENST00000358637.4 NM_198188 NM_198187 NM_001184734 NM_198186 NM_001184735 uc004bjp.3 uc004bjq.3 uc022bmn.2 BC029272 AK024064 BC010680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000288520.9:0 ENST00000341734.8:0 ENST00000358637.4:0 NM_198188:0 NM_198187:0 NM_001184734:0 NM_198186:0 NM_001184735:0 uc004bjp.3:0 uc004bjq.3:0 uc022bmn.2:0 BC029272:0 AK024064:0 BC010680:0 BC093835:108 BC143289:108 BC143293:108 BC143292:108 BC101667:109 KJ898468:400 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_198186 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
