Difference between revisions of "TSS:Mm 123937.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK198503:-5 AK197360:-13 uc007ups.1:-102 AB030204:-102 |chr=chr14 |cpg_percent=0.045 |distance=-5 |distance_to_tss=16869 |end=73368403 |entrez_id=16432...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Bri= | ||
| + | |Bri2= | ||
| + | |Bricd2b= | ||
| + | |D14Sel6= | ||
| + | |E25BMM= | ||
|all_trans=AK198503:-5 AK197360:-13 uc007ups.1:-102 AB030204:-102 | |all_trans=AK198503:-5 AK197360:-13 uc007ups.1:-102 AB030204:-102 | ||
|chr=chr14 | |chr=chr14 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=16869 | |distance_to_tss=16869 | ||
|end=73368403 | |end=73368403 | ||
| + | |end_of_center_position=73368402 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1309517 | |hgnc_mgi_id=MGI:1309517 | ||
| + | |imBRI2= | ||
|nearest_ensembl=ENSMUSG00000022108 | |nearest_ensembl=ENSMUSG00000022108 | ||
|nearest_promoter_id=NM_008410 | |nearest_promoter_id=NM_008410 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=73368400 | |start=73368400 | ||
| + | |start_of_center_position=73368401 | ||
|strand=- | |strand=- | ||
|transcript_name=AK198503 | |transcript_name=AK198503 | ||
Revision as of 11:23, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73368401 |
|---|---|
| End of the center position in the TSS region: | 73368402 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK198503 |
|---|---|
| Distance: | -5 |
| Num_trans: | 4 |
| All_trans: | AK198503:-5 AK197360:-13 uc007ups.1:-102 AB030204:-102 |
TATA-Box annotation
| Distance to TSS: | 16869 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
