Difference between revisions of "TSS:Hg 102271.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-22 |entrez_id=1620 |gc_percent=0.746269 |gene_alias=DBC1|DBCCR1|FAM5A |gene_description=BMP/retinoic acid inducible neural spe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DBCCR1= | ||
| + | |FAM5A= | ||
| + | |all_trans=ENST00000265922.7:10 uc004bkc.3:10 NM_014618:16 AK293649:42 ENST00000373964.2:52 uc004bkd.3:52 BC021560:52 AF027734:54 BC065196:63 BC071702:175 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=10 | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
| + | |end=119369490 | ||
|entrez_id=1620 | |entrez_id=1620 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=DBC1|DBCCR1|FAM5A | |gene_alias=DBC1|DBCCR1|FAM5A | ||
|gene_description=BMP/retinoic acid inducible neural specific 1 | |gene_description=BMP/retinoic acid inducible neural specific 1 | ||
| − | |gene_name=BRINP1 | + | |gene_id=1620 |
| + | |gene_name=BMP/retinoic acid inducible neural specific 1 | ||
| + | |gene_source=HGNC:2687 | ||
| + | |gene_symbol=BRINP1 | ||
| + | |gene_synonyms=FAM5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2687 | ||
|nearest_ensembl=ENSG00000078725 | |nearest_ensembl=ENSG00000078725 | ||
|nearest_promoter_id=NM_014618 | |nearest_promoter_id=NM_014618 | ||
|nearest_refseq=NM_014618 | |nearest_refseq=NM_014618 | ||
|nearest_unigene=Hs.532316 | |nearest_unigene=Hs.532316 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=119369476 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000265922.7 uc004bkc.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102271.1 | |tss_id=hg_102271.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O60477 | ||
}} | }} | ||
Revision as of 19:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000265922.7 uc004bkc.3 |
|---|---|
| Distance: | 10 |
| Num_trans: | 10 |
| All_trans: | ENST00000265922.7:10 uc004bkc.3:10 NM_014618:16 AK293649:42 ENST00000373964.2:52 uc004bkd.3:52 BC021560:52 AF027734:54 BC065196:63 BC071702:175 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_014618 |
| Entrez ID: | 1620 |
| Nearest Unigene: | Hs.532316 |
| Nearest Refseq: | NM_014618 |
| Nearest Ensembl: | ENSG00000078725 |
| Gene Name: | BMP/retinoic acid inducible neural specific 1 |
| Gene Alias: | DBC1 |
| Gene Description: | BMP/retinoic acid inducible neural specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
