Difference between revisions of "TSS:Hg 100024.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-133195 |entrez_id=4781 |gc_percent=0.40796 |gene_alias=CTF|HMGIC/NFIB|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |gene_description=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HMGIC/NFIB= | ||
| + | |NF-I/B= | ||
| + | |NF1-B= | ||
| + | |NFI-B= | ||
| + | |NFI-RED= | ||
| + | |NFIB2= | ||
| + | |NFIB3= | ||
| + | |all_trans=ENST00000421119.1:129 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=129 | ||
|distance_to_tss=-133195 | |distance_to_tss=-133195 | ||
| + | |end=14532186 | ||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=14532170 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000421119.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100024.1 | |tss_id=hg_100024.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 16:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000421119.1 |
|---|---|
| Distance: | 129 |
| Num_trans: | 1 |
| All_trans: | ENST00000421119.1:129 |
TATA-Box annotation
| Distance to TSS: | -133195 |
|---|---|
| Nearest PromoterID: | NM_001190738 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | NFIB |
| Gene Alias: | CTF |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
