Difference between revisions of "TSS:Hg 102279.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-158137 |entrez_id=406939 |gc_percent=0.502488 |gene_alias=MIR147|MIRN147|hsa-mir-147a |gene_description=microRNA 147a |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MIRN147= | ||
| + | |all_trans=AF087969:160 ENST00000433194.6:-253 uc064vim.1:-253 ENST00000480467.5:-296 uc064vin.1:-296 ENST00000484546.1:-463 uc064vio.1:-463 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=160 | ||
|distance_to_tss=-158137 | |distance_to_tss=-158137 | ||
| + | |end=120403199 | ||
|entrez_id=406939 | |entrez_id=406939 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=MIR147|MIRN147|hsa-mir-147a | |gene_alias=MIR147|MIRN147|hsa-mir-147a | ||
|gene_description=microRNA 147a | |gene_description=microRNA 147a | ||
| − | |gene_name= | + | |gene_id=55755 |
| + | |gene_name=CDK5 regulatory subunit associated protein 2 | ||
| + | |gene_source=HGNC:18672 | ||
| + | |gene_symbol=CDK5RAP2 | ||
| + | |gene_synonyms=C48 CEP215 FLJ10867 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:18672 | ||
| + | |hsa-mir-147a= | ||
|nearest_ensembl=ENSG00000207814 | |nearest_ensembl=ENSG00000207814 | ||
|nearest_promoter_id=NR_029604 | |nearest_promoter_id=NR_029604 | ||
|nearest_refseq=NR_029604 | |nearest_refseq=NR_029604 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=120403175 | ||
| + | |strand=- | ||
| + | |transcript_name=AF087969 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102279.1 | |tss_id=hg_102279.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF087969 |
|---|---|
| Distance: | 160 |
| Num_trans: | 7 |
| All_trans: | AF087969:160 ENST00000433194.6:-253 uc064vim.1:-253 ENST00000480467.5:-296 uc064vin.1:-296 ENST00000484546.1:-463 uc064vio.1:-463 |
TATA-Box annotation
| Distance to TSS: | -158137 |
|---|---|
| Nearest PromoterID: | NR_029604 |
| Entrez ID: | 406939 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029604 |
| Nearest Ensembl: | ENSG00000207814 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | MIR147 |
| Gene Description: | microRNA 147a |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
