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Difference between revisions of "TSS:Hg 102710.1"

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Line 8: Line 8:
 
|distance_to_tss=21
 
|distance_to_tss=21
 
|end=128829821
 
|end=128829821
 +
|end_of_center_position=128829801
 
|entrez_id=51490
 
|entrez_id=51490
 
|gc_percent=0.696517
 
|gc_percent=0.696517
|gene_alias=C9orf114|CENP-32|HSPC109
+
|gene_alias=C9orf114
 
|gene_description=SPOUT domain containing methyltransferase 1
 
|gene_description=SPOUT domain containing methyltransferase 1
 
|gene_id=51490
 
|gene_id=51490
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=128829779
 
|start=128829779
 +
|start_of_center_position=128829800
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000361256.9 ENST00000622809.1 NM_016390 uc004bwd.3 uc064wgx.1 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792
 
|transcript_name=ENST00000361256.9 ENST00000622809.1 NM_016390 uc004bwd.3 uc064wgx.1 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792

Revision as of 13:49, 11 May 2019

Basic information about the TSS


TSS ID:hg_102710.1
Species:human
Chr:chr9
TSS Classification:yes
Start:128829779
End:128829821
Strand:-
TSS Score:1
Start of the center position in the TSS region:128829800
End of the center position in the TSS region:128829801



Gene and protein annotation


Transcript_name:ENST00000361256.9 ENST00000622809.1 NM_016390 uc004bwd.3 uc064wgx.1 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792
Distance:0
GeneID:51490
HGNC/MGI_ID:HGNC:26933
UniProt_ID:A0A087WYA7 B4E0X4 Q5T280 Q9P041
Gene_name:chromosome 9 open reading frame 114
Gene_symbol:C9orf114
Gene_synonyms:CENP-32 HSPC109
Gene_source:HGNC:26933



Transcript annotation


Transcript_name:ENST00000361256.9 ENST00000622809.1 NM_016390 uc004bwd.3 uc064wgx.1 AL110193 AK303563 BC010579 BC046133 BC063644 BC021273 BC056890 BC033677 BC039590 AF161459 HQ448052 CU687792
Distance:0
Num_trans:19
All_trans:ENST00000361256.9:0 ENST00000622809.1:0 NM_016390:0 uc004bwd.3:0 uc064wgx.1:0 AL110193:0 AK303563:0 BC010579:0 BC046133:0 BC063644:0 BC021273:0 BC056890:0 BC033677:0 BC039590:0 AF161459:0 HQ448052:0 CU687792:0 ENST00000466556.5:1 uc064wha.1:1



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NM_016390
Entrez ID:51490
Nearest Unigene:Hs.224137
Nearest Refseq:NM_016390
Nearest Ensembl:ENSG00000198917
Gene Name:chromosome 9 open reading frame 114
Gene Alias:C9orf114
Gene Description:SPOUT domain containing methyltransferase 1
Gene Type:protein-coding
CpG%:0.11
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):