Difference between revisions of "TSS:Mm 125971.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000163991.2:54 NM_001195537:54 uc011zut.1:54 GU144514:54 |chr=chr15 |cpg_percent=0.075 |distance=54 |distance_to_tss=-65 |end=76294380 |entrez_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm10345= | ||
| + | |MA-nSMase= | ||
|all_trans=ENSMUST00000163991.2:54 NM_001195537:54 uc011zut.1:54 GU144514:54 | |all_trans=ENSMUST00000163991.2:54 NM_001195537:54 uc011zut.1:54 GU144514:54 | ||
|chr=chr15 | |chr=chr15 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-65 | |distance_to_tss=-65 | ||
|end=76294380 | |end=76294380 | ||
| + | |end_of_center_position=76294369 | ||
|entrez_id=100503915 | |entrez_id=100503915 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=ENSMUSG00000071724 | + | |gene_alias=ENSMUSG00000071724 |
|gene_description=sphingomyelin phosphodiesterase 5 | |gene_description=sphingomyelin phosphodiesterase 5 | ||
|gene_id=100503915 | |gene_id=100503915 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=76294357 | |start=76294357 | ||
| + | |start_of_center_position=76294368 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000163991.2 NM_001195537 uc011zut.1 GU144514 | |transcript_name=ENSMUST00000163991.2 NM_001195537 uc011zut.1 GU144514 | ||
Revision as of 16:59, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 76294368 |
|---|---|
| End of the center position in the TSS region: | 76294369 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000163991.2 NM_001195537 uc011zut.1 GU144514 |
|---|---|
| Distance: | 54 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000163991.2:54 NM_001195537:54 uc011zut.1:54 GU144514:54 |
TATA-Box annotation
| Distance to TSS: | -65 |
|---|---|
| Nearest PromoterID: | NM_001195537 |
| Entrez ID: | 100503915 |
| Nearest Unigene: | Mm.393455 |
| Nearest Refseq: | NM_001195537 |
| Nearest Ensembl: | ENSMUSG00000071724 |
| Gene Name: | sphingomyelin phosphodiesterase 5 |
| Gene Alias: | ENSMUSG00000071724 |
| Gene Description: | sphingomyelin phosphodiesterase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
