Difference between revisions of "TSS:Mm 1265.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000184516.1:-478 |chr=chr1 |cpg_percent=0.01 |distance=-478 |distance_to_tss=-553 |end=63178480 |entrez_id=100217464 |gc_percent=0.462687 |gene...") |
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|distance_to_tss=-553 | |distance_to_tss=-553 | ||
|end=63178480 | |end=63178480 | ||
| + | |end_of_center_position=63178471 | ||
|entrez_id=100217464 | |entrez_id=100217464 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=63178460 | |start=63178460 | ||
| + | |start_of_center_position=63178470 | ||
|strand=+ | |strand=+ | ||
|tata_box="-84(GCCTAGAAAGGG,-,0.00)" | |tata_box="-84(GCCTAGAAAGGG,-,0.00)" | ||
Revision as of 19:05, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 63178470 |
|---|---|
| End of the center position in the TSS region: | 63178471 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000184516.1 |
|---|---|
| Distance: | -478 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000184516.1:-478 |
TATA-Box annotation
| Distance to TSS: | -553 |
|---|---|
| Nearest PromoterID: | NR_028558 |
| Entrez ID: | 100217464 |
| Nearest Unigene: | Mm.484706 |
| Nearest Refseq: | NR_028558 |
| Nearest Ensembl: | ENSMUSG00000064602 |
| Gene Name: | "predicted gene, 27390" |
| Gene Alias: | MBI-83 |
| Gene Description: | "small nucleolar RNA, H/ACA box 41" |
| Gene Type: | snoRNA |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-84(GCCTAGAAAGGG,-,0.00)" |
