Difference between revisions of "TSS:Hg 102290.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=102692 |entrez_id=55755 |gc_percent=0.378109 |gene_alias=C48|Cep215|MCPH3 |gene_description=CDK5 regulatory subunit associated...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Cep215= | ||
| + | |MCPH3= | ||
| + | |all_trans=ENST00000416449.5:116 uc064vil.1:116 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=116 | ||
|distance_to_tss=102692 | |distance_to_tss=102692 | ||
| + | |end=120477487 | ||
|entrez_id=55755 | |entrez_id=55755 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=C48|Cep215|MCPH3 | |gene_alias=C48|Cep215|MCPH3 | ||
|gene_description=CDK5 regulatory subunit associated protein 2 | |gene_description=CDK5 regulatory subunit associated protein 2 | ||
| − | |gene_name=CDK5RAP2 | + | |gene_id=55755 |
| + | |gene_name=CDK5 regulatory subunit associated protein 2 | ||
| + | |gene_source=HGNC:18672 | ||
| + | |gene_symbol=CDK5RAP2 | ||
| + | |gene_synonyms=C48 CEP215 FLJ10867 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18672 | ||
|nearest_ensembl=ENSG00000136861 | |nearest_ensembl=ENSG00000136861 | ||
|nearest_promoter_id=NR_073558 | |nearest_promoter_id=NR_073558 | ||
|nearest_refseq=NM_018249 | |nearest_refseq=NM_018249 | ||
|nearest_unigene=Hs.269560 | |nearest_unigene=Hs.269560 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=120477469 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000416449.5 uc064vil.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102290.1 | |tss_id=hg_102290.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1AMJ5 | ||
}} | }} | ||
Revision as of 19:20, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000416449.5 uc064vil.1 |
|---|---|
| Distance: | 116 |
| Num_trans: | 2 |
| All_trans: | ENST00000416449.5:116 uc064vil.1:116 |
TATA-Box annotation
| Distance to TSS: | 102692 |
|---|---|
| Nearest PromoterID: | NR_073558 |
| Entrez ID: | 55755 |
| Nearest Unigene: | Hs.269560 |
| Nearest Refseq: | NM_018249 |
| Nearest Ensembl: | ENSG00000136861 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | C48 |
| Gene Description: | CDK5 regulatory subunit associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
