Difference between revisions of "TSS:Hg 102305.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=106 |entrez_id=26190 |gc_percent=0.731343 |gene_alias=FBW2|Fwd2|Md6 |gene_description=F-box and WD repeat domain containing 2 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Fwd2= | ||
| + | |Md6= | ||
| + | |all_trans=ENST00000474117.1:0 uc064viz.1:0 BC110334:0 AF145024:-1 AF193594:-1 BC000239:-9 BC018738:-10 ENST00000476481.1:-12 uc064vja.1:-12 ENST00000453291.1:-14 uc064viy.1:-14 AK300066:-23 AK091860:-23 AK314385:-23 ENST00000608872.5:-44 uc004bkm.2:-44 AK022484:-44 AF176698:93 NM_012164:-94 DQ598105:237 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=106 | |distance_to_tss=106 | ||
| + | |end=120793368 | ||
|entrez_id=26190 | |entrez_id=26190 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=FBW2|Fwd2|Md6 | |gene_alias=FBW2|Fwd2|Md6 | ||
|gene_description=F-box and WD repeat domain containing 2 | |gene_description=F-box and WD repeat domain containing 2 | ||
| − | |gene_name=FBXW2 | + | |gene_id=26190 |
| + | |gene_name=F-box and WD repeat domain containing 2 | ||
| + | |gene_source=HGNC:13608 | ||
| + | |gene_symbol=FBXW2 | ||
| + | |gene_synonyms=FBW2 Fwd2 Md6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13608 | ||
|nearest_ensembl=ENSG00000119402 | |nearest_ensembl=ENSG00000119402 | ||
|nearest_promoter_id=NM_012164 | |nearest_promoter_id=NM_012164 | ||
|nearest_refseq=NM_012164 | |nearest_refseq=NM_012164 | ||
|nearest_unigene=Hs.494985 | |nearest_unigene=Hs.494985 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=120793343 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000474117.1 uc064viz.1 BC110334 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102305.1 | |tss_id=hg_102305.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:20, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000474117.1 uc064viz.1 BC110334 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000474117.1:0 uc064viz.1:0 BC110334:0 AF145024:-1 AF193594:-1 BC000239:-9 BC018738:-10 ENST00000476481.1:-12 uc064vja.1:-12 ENST00000453291.1:-14 uc064viy.1:-14 AK300066:-23 AK091860:-23 AK314385:-23 ENST00000608872.5:-44 uc004bkm.2:-44 AK022484:-44 AF176698:93 NM_012164:-94 DQ598105:237 |
TATA-Box annotation
| Distance to TSS: | 106 |
|---|---|
| Nearest PromoterID: | NM_012164 |
| Entrez ID: | 26190 |
| Nearest Unigene: | Hs.494985 |
| Nearest Refseq: | NM_012164 |
| Nearest Ensembl: | ENSG00000119402 |
| Gene Name: | F-box and WD repeat domain containing 2 |
| Gene Alias: | FBW2 |
| Gene Description: | F-box and WD repeat domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
