Difference between revisions of "TSS:Hg 10298.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
|end=11654400 | |end=11654400 | ||
| + | |end_of_center_position=11654395 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=FBG3 | + | |gene_alias=FBG3 |
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
|gene_id=26232 | |gene_id=26232 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=11654389 | |start=11654389 | ||
| + | |start_of_center_position=11654394 | ||
|strand=- | |strand=- | ||
|tata_box="-68(GGCCTTTAAGAG,-,0.00),-67(GCCTTTAAGAGG,-,0.00),-66(CCTTTAAGAGGC,+,0.00)" | |tata_box="-68(GGCCTTTAAGAG,-,0.00),-67(GCCTTTAAGAGG,-,0.00),-66(CCTTTAAGAGGC,+,0.00)" | ||
Revision as of 17:28, 10 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11654394 |
|---|---|
| End of the center position in the TSS region: | 11654395 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC025233 |
|---|---|
| Distance: | -15 |
| Num_trans: | 18 |
| All_trans: | BC025233:-15 BC096747:-31 AK313019:-31 AK308531:46 DQ892848:48 DQ892849:48 DQ896095:48 BC014957:-49 CR542110:50 KJ898609:50 CU692940:50 AB463629:50 ENST00000466919.1:193 uc057cgi.1:193 ENST00000354287.4:-282 uc001asj.4:-282 AF187318:-282 NM_012168:-431 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001304791 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG3 |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-68(GGCCTTTAAGAG,-,0.00),-67(GCCTTTAAGAGG,-,0.00),-66(CCTTTAAGAGGC,+,0.00)" |
