Difference between revisions of "TSS:Hg 10300.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance_to_tss=54 | |distance_to_tss=54 | ||
|end=11654436 | |end=11654436 | ||
| + | |end_of_center_position=11654430 | ||
|entrez_id=93611 | |entrez_id=93611 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=FBG3 | + | |gene_alias=FBG3 |
|gene_description=F-box protein 44 | |gene_description=F-box protein 44 | ||
|gene_id=26232 | |gene_id=26232 | ||
| Line 28: | Line 29: | ||
|species=human | |species=human | ||
|start=11654422 | |start=11654422 | ||
| + | |start_of_center_position=11654429 | ||
|strand=- | |strand=- | ||
|tata_box="-34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00)" | |tata_box="-34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00)" | ||
Revision as of 17:28, 10 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11654429 |
|---|---|
| End of the center position in the TSS region: | 11654430 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC096747 AK313019 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | BC096747:0 AK313019:0 BC025233:8 BC014957:-13 AK308531:79 DQ892848:81 DQ892849:81 DQ896095:81 CR542110:83 KJ898609:83 CU692940:83 AB463629:83 ENST00000466919.1:226 uc057cgi.1:226 ENST00000354287.4:-246 uc001asj.4:-246 AF187318:-246 NM_012168:-395 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_001304791 |
| Entrez ID: | 93611 |
| Nearest Unigene: | Hs.556006 |
| Nearest Refseq: | NM_033182 |
| Nearest Ensembl: | ENSG00000132879 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG3 |
| Gene Description: | F-box protein 44 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00)" |
